RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 NKRFO15226 690 aaKnown RBP eCLIP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 PPP1R2P41236 205 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 NFIAQ12857 509 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 SEC23AQ15436 765 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 PKN1Q16512 942 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 TDRD12Q587J7 1177 aaKnown RBP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 ARL6IP4Q66PJ3 421 aaKnown RBP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 PTPRN2Q92932 1015 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 NUDCD1Q96RS6 583 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 ZSCAN10Q96SZ4 725 aaPredicted RBP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 ZMYND12Q9H0C1 365 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 STMN4Q9H169 189 aaPredicted RBP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 VCX3BQ9H321 246 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 VCX3AQ9NNX9 186 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 TXLNGQ9NUQ3 528 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 FGFR1OP2Q9NVK5 253 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 TLDC2A0PJX2 215 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 KRIT1O00522 736 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 ATP5HO75947 161 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 SERPING1P05155 500 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 TRAPPC10P48553 1259 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 NAALADL2Q58DX5 795 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 AGGF1Q8N302 714 aaeCLIP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 ARHGAP18Q8N392 663 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 CFAP61Q8NHU2 1237 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 NEK9Q8TD19 979 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 SYN2Q92777 582 aaPredicted RBP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 AZIN2Q96A70 460 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 TIPINQ9BVW5 301 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 LRCH1Q9Y2L9 728 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 NOC2LQ9Y3T9 749 aaKnown RBP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 FOCADQ5VW36 1801 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 TSPY2A6NKD2 308 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 BTNL10A8MVZ5 291 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 TCP11X1B4DZS4 312 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 SMAPO00193 183 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 NFKBIEO00221 500 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 TTI1O43156 1089 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 PCP11498 1178 aaKnown RBP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 GSTT1P30711 240 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 PMS2P54278 862 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 PPP2R5BQ15173 497 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 MUM1Q2TAK8 710 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 DENND2CQ68D51 928 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 RNF43Q68DV7 783 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 GPIHBP1Q8IV16 184 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 UCMAQ8WVF2 138 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 ZNF333Q96JL9 665 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 ZDHHC15Q96MV8 337 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 MTA3Q9BTC8 594 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 LRMDAQ9H2I8 198 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 OCEL1Q9H607 264 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 GALNT8Q9NY28 637 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 BIN2Q9UBW5 565 aaPredicted RBP12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 SLC4A7Q9Y6M7 1214 aa12.24□□□□□ -0.45
SEMA4D-221ENST00000537934 MYH6P13533 1939 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 ROBO3Q96MS0 1386 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 SLURP2P0DP57 97 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 FKBP1AP62942 108 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 SLC18A3Q16572 532 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 TNFAIP8L3Q5GJ75 292 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 WASHC2DQ5SRD0 308 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 TAOK1Q7L7X3 1001 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 TRIM42Q8IWZ5 723 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 ZNF654Q8IZM8 581 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 NCSTNQ92542 709 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 TMEM237Q96Q45 408 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 TMEM109Q9BVC6 243 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 TAOK3Q9H2K8 898 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 DPH5Q9H2P9 285 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 KBTBD4Q9NVX7 518 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 CNOT7Q9UIV1 285 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 GMEB1Q9Y692 573 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 FER1L6Q2WGJ9 1857 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 GM2AP17900 193 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 TFAP4Q01664 338 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 ENOX2Q16206 610 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 MAN2A1Q16706 1144 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 SOGA3Q5TF21 947 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 ZFPM1Q8IX07 1006 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 ATP8B4Q8TF62 1192 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 DDX23Q9BUQ8 820 aaKnown RBP12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 MKNK2Q9HBH9 465 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 PREBQ9HCU5 417 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 ZNF510Q9Y2H8 683 aa12.23□□□□□ -0.45
SEMA4D-221ENST00000537934 ABCB11O95342 1321 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 MROH7Q68CQ1 1323 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 PSME4Q14997 1843 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 NVLO15381 856 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 PRPF3O43395 683 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 LMNAP02545 664 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 AFPP02771 609 aaKnown RBP12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 ZBTB48P10074 688 aaPredicted RBP12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 MCM7P33993 719 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 CACNA2D1P54289 1103 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 NLRP5P59047 1200 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 BTNL9Q6UXG8 535 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 NIM1KQ8IY84 436 aa12.22□□□□□ -0.45
SEMA4D-221ENST00000537934 RASGEF1CQ8N431 466 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms