RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 NRDCO43847 1150 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 EFCAB14O75071 495 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 DGAT1O75907 488 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 SKILP12757 684 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 WDR5P61964 334 aaKnown RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 CDC42EP1Q00587 391 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 IKBKEQ14164 716 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 EMC2Q15006 297 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 CT47A1Q5JQC4 288 aaPredicted RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 KCTD17Q8N5Z5 321 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 TMEM40Q8WWA1 233 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 OSMRQ99650 979 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 SUCLA2Q9P2R7 463 aaPredicted RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 FBXO2Q9UK22 296 aaPredicted RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 SRPRBQ9Y5M8 271 aaKnown RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 SLC4A7Q9Y6M7 1214 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 MYO9BQ13459 2157 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 ZBBXA8MT70 800 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 SLC26A4O43511 780 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 CD52P31358 61 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 SMAD3P84022 425 aaKnown RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 MYL5Q02045 173 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 NT5DC1Q5TFE4 455 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 FAM109BQ6ICB4 259 aaPredicted RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 KRBA2Q6ZNG9 492 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 TRIML1Q8N9V2 468 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 PHOSPHO2Q8TCD6 241 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 TCP11Q8WWU5 503 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 TMEM143Q96AN5 459 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 CCDC43Q96MW1 224 aaKnown RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 PNMA5Q96PV4 448 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 PPP1R16BQ96T49 567 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 MTRQ99707 1265 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 CCDC94Q9BW85 323 aaPredicted RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 ERVK-5Q9HDB9 667 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 BMP2KQ9NSY1 1161 aaPredicted RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 PADI3Q9ULW8 664 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 GINS2Q9Y248 185 aa12.72□□□□□ -0.37
SNHG1-206ENST00000537925 NOC2LQ9Y3T9 749 aaKnown RBP12.72□□□□□ -0.37
SNHG1-206ENST00000537925 FNDC1Q4ZHG4 1894 aaPredicted RBP12.71□□□□□ -0.37
SNHG1-206ENST00000537925 NLRC5Q86WI3 1866 aa12.71□□□□□ -0.37
SNHG1-206ENST00000537925 CDH23Q9H251 3354 aa12.71□□□□□ -0.37
SNHG1-206ENST00000537925 COL6A3P12111 3177 aa12.71□□□□□ -0.37
SNHG1-206ENST00000537925 E9PMD0 336 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 CCP110O43303 1012 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 RPS6KA5O75582 802 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 EIF4BP23588 611 aaKnown RBP12.71□□□□□ -0.38
SNHG1-206ENST00000537925 MARCKSP29966 332 aaPredicted RBP12.71□□□□□ -0.38
SNHG1-206ENST00000537925 GRB10Q13322 594 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 TPD52L1Q16890 204 aaPredicted RBP12.71□□□□□ -0.38
SNHG1-206ENST00000537925 KANK3Q6NY19 840 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 FAM43BQ6ZT52 329 aaPredicted RBP12.71□□□□□ -0.38
SNHG1-206ENST00000537925 KCNK18Q7Z418 384 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 CABP7Q86V35 215 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 ZNF410Q86VK4 478 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 RHPN2Q8IUC4 686 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 KSR1Q8IVT5 923 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 CCAR2Q8N163 923 aaKnown RBP12.71□□□□□ -0.38
SNHG1-206ENST00000537925 CCDC112Q8NEF3 446 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 PRPF31Q8WWY3 499 aaKnown RBP12.71□□□□□ -0.38
SNHG1-206ENST00000537925 PSPC1Q8WXF1 523 aaKnown RBP12.71□□□□□ -0.38
SNHG1-206ENST00000537925 SLC9A7Q96T83 725 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 COL25A1Q9BXS0 654 aaPredicted RBP12.71□□□□□ -0.38
SNHG1-206ENST00000537925 NT5C3AQ9H0P0 336 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 CSRNP2Q9H175 543 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 BHMT2Q9H2M3 363 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 ATP6V0A4Q9HBG4 840 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 KCNH3Q9ULD8 1083 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 DNM3Q9UQ16 869 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 COL4A3BPQ9Y5P4 624 aa12.71□□□□□ -0.38
SNHG1-206ENST00000537925 CHD9Q3L8U1 2897 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 A0A087WZ62 844 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.7□□□□□ -0.38
SNHG1-206ENST00000537925 ARHGEF35A5YM69 484 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 GRXCR1A8MXD5 290 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 ASAP2O43150 1006 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 USO1O60763 962 aaKnown RBP12.7□□□□□ -0.38
SNHG1-206ENST00000537925 EYA4O95677 639 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 DARSP14868 501 aaKnown RBP12.7□□□□□ -0.38
SNHG1-206ENST00000537925 ATP2A2P16615 1042 aaKnown RBP12.7□□□□□ -0.38
SNHG1-206ENST00000537925 ARL2P36404 184 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 UBA7P41226 1012 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 DEFB103AP81534 67 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 PAK2Q13177 524 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 TMEM119Q4V9L6 283 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 ODR4Q5SWX8 454 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 CEP135Q66GS9 1140 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.7□□□□□ -0.38
SNHG1-206ENST00000537925 FAM228AQ86W67 206 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 MCPH1Q8NEM0 835 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 NLRP7Q8WX94 980 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 LRCH3Q96II8 777 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 ZNF668Q96K58 619 aaPredicted RBP12.7□□□□□ -0.38
SNHG1-206ENST00000537925 C16orf45Q96MC5 204 aaPredicted RBP12.7□□□□□ -0.38
SNHG1-206ENST00000537925 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
SNHG1-206ENST00000537925 FDXACB1Q9BRP7 624 aaPredicted RBP12.7□□□□□ -0.38
SNHG1-206ENST00000537925 FTHL17Q9BXU8 183 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms