RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 DIS3LQ8TF46 1054 aaKnown RBP6.9□□□□□ -1.3
PRKDC-208ENST00000536710 DPF2Q92785 391 aa6.9□□□□□ -1.3
PRKDC-208ENST00000536710 RUNDC1Q96C34 613 aa6.9□□□□□ -1.3
PRKDC-208ENST00000536710 MVB12AQ96EY5 273 aa6.9□□□□□ -1.3
PRKDC-208ENST00000536710 ACO2Q99798 780 aaKnown RBP6.9□□□□□ -1.3
PRKDC-208ENST00000536710 FDXACB1Q9BRP7 624 aaPredicted RBP6.9□□□□□ -1.3
PRKDC-208ENST00000536710 FBXO10Q9UK96 956 aa6.9□□□□□ -1.3
PRKDC-208ENST00000536710 LIMCH1Q9UPQ0 1083 aa6.9□□□□□ -1.3
PRKDC-208ENST00000536710 HTRA2O43464 458 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-208ENST00000536710 KNG1P01042 644 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 NBPF7P0C2Y1 421 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-208ENST00000536710 FXR1P51114 621 aaKnown RBP eCLIP6.89□□□□□ -1.312e-7■■□□□ 11.7
PRKDC-208ENST00000536710 STAT5BP51692 787 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 RHBDL3P58872 404 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 UBE4AQ14139 1066 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 PGS1Q32NB8 556 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 SYCP2LQ5T4T6 812 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 KLHDC10Q6PID8 442 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 FAM180AQ6UWF9 173 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 FAM129CQ86XR2 697 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 LINC00482Q8N8I6 264 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 ZBTB34Q8NCN2 500 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 HDAC10Q969S8 669 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 WDR92Q96MX6 357 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 PSMD1Q99460 953 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 CHMP4AQ9BY43 222 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 MAN1C1Q9NR34 630 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 FAM50BQ9Y247 325 aa6.89□□□□□ -1.31
PRKDC-208ENST00000536710 A0A0A6YYK5 440 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-208ENST00000536710 PRAMEF4O60810 478 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 MAFO75444 373 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-208ENST00000536710 SEC24DO94855 1032 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-208ENST00000536710 CHGBP05060 677 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 MCAMP43121 646 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 MLLT6P55198 1093 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-208ENST00000536710 DLG4P78352 724 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 CD69Q07108 199 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 BRD3Q15059 726 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 MAN2A1Q16706 1144 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 C3orf36Q3SXR2 165 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 TMEM200BQ69YZ2 307 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 MIGA2Q7L4E1 593 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 IFNL2Q8IZJ0 200 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 RIN2Q8WYP3 895 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-208ENST00000536710 PAWRQ96IZ0 340 aaKnown RBP6.88□□□□□ -1.31
PRKDC-208ENST00000536710 SOX7Q9BT81 388 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 L2HGDHQ9H9P8 463 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 GCM1Q9NP62 436 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 RBM12Q9NTZ6 932 aaKnown RBP6.88□□□□□ -1.31
PRKDC-208ENST00000536710 IRAK3Q9Y616 596 aa6.88□□□□□ -1.31
PRKDC-208ENST00000536710 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-208ENST00000536710 AKR1B10O60218 316 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 FSBPO95073 299 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 HMGCRP04035 888 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 HNRNPLP14866 589 aaKnown RBP eCLIP6.87□□□□□ -1.31
PRKDC-208ENST00000536710 IL13P35225 146 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 PURAQ00577 322 aaKnown RBP6.87□□□□□ -1.31
PRKDC-208ENST00000536710 BIRC2Q13490 618 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 LLGL1Q15334 1064 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 COBLL1Q53SF7 1204 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 CCDC157Q569K6 752 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 RTKN2Q8IZC4 609 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 MARCH10Q8NA82 808 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-208ENST00000536710 PPP1R35Q8TAP8 253 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 TTC17Q96AE7 1141 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 C1GALT1C1Q96EU7 318 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 FAM193BQ96PV7 902 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-208ENST00000536710 C7orf25Q9BPX7 421 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 SARGQ9BW04 601 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 HAPLN2Q9GZV7 340 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 FAM204AQ9H8W3 233 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 FAM184BQ9ULE4 1060 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 IPPQ9Y573 584 aa6.87□□□□□ -1.31
PRKDC-208ENST00000536710 DAPK3O43293 454 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 LY86O95711 162 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 PLA2G1BP04054 148 aaKnown RBP6.86□□□□□ -1.31
PRKDC-208ENST00000536710 TRIM27P14373 513 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 EDNRBP24530 442 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 POLD1P28340 1107 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 ADSLP30566 484 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-208ENST00000536710 OS9Q13438 667 aaPredicted RBP6.86□□□□□ -1.31
PRKDC-208ENST00000536710 IL10RAQ13651 578 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 DENND1CQ8IV53 801 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 RHOT1Q8IXI2 618 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 GPR156Q8NFN8 814 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 ZCCHC14Q8WYQ9 949 aaKnown RBP6.86□□□□□ -1.31
PRKDC-208ENST00000536710 PMM1Q92871 262 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 KAT5Q92993 513 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 SIGLEC10Q96LC7 697 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 UIMC1Q96RL1 719 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 MPHOSPH6Q99547 160 aaKnown RBP6.86□□□□□ -1.31
PRKDC-208ENST00000536710 PCDHA13Q9Y5I0 950 aa6.86□□□□□ -1.31
PRKDC-208ENST00000536710 DDX3XO00571 662 aaKnown RBP eCLIP6.85□□□□□ -1.31
PRKDC-208ENST00000536710 COL6A1P12109 1028 aa6.85□□□□□ -1.31
PRKDC-208ENST00000536710 MEOX1P50221 254 aa6.85□□□□□ -1.31
PRKDC-208ENST00000536710 PPP3CAQ08209 521 aa6.85□□□□□ -1.31
PRKDC-208ENST00000536710 CNKSR3Q6P9H4 555 aa6.85□□□□□ -1.31
PRKDC-208ENST00000536710 CCDC149Q6ZUS6 474 aa6.85□□□□□ -1.31
PRKDC-208ENST00000536710 BCL6BQ8N143 479 aaPredicted RBP6.85□□□□□ -1.31
PRKDC-208ENST00000536710 PRR18Q8N4B5 295 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms