RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 PLEKHA8P1O95397 391 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 SYF2O95926 243 aaKnown RBP12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 ATP1A1P05023 1023 aaKnown RBP12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 GOLGA6DP0CG33 693 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 ACRP10323 421 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 IDEP14735 1019 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 CSF2RAP15509 400 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 CCNE1P24864 410 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 CASP1P29466 404 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 CYP2C18P33260 490 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 MCM7P33993 719 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 ORC2Q13416 577 aaPredicted RBP12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 NNTQ13423 1086 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 NPY5RQ15761 445 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 DUSP28Q4G0W2 176 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 EARS2Q5JPH6 523 aaKnown RBP12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 EMBQ6PCB8 327 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 ADGRF4Q8IZF3 695 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 DAGLBQ8NCG7 672 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 ATRIPQ8WXE1 791 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 CABS1Q96KC9 395 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 CCDC42Q96M95 316 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 RUFY1Q96T51 708 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 MMS19Q96T76 1030 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 CDX2Q99626 313 aaPredicted RBP12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 TUBGCP2Q9BSJ2 902 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 TRPV6Q9H1D0 765 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 NUCKS1Q9H1E3 243 aaKnown RBP12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 GOLGA6AQ9NYA3 693 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 PCDHA4Q9UN74 947 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 CHUKO15111 745 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 TNFRSF8P28908 595 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 PAFAH1B1P43034 410 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 ADCY2Q08462 1091 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 TBC1D8BQ0IIM8 1120 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 CDC37Q16543 378 aaPredicted RBP12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 TMEM240Q5SV17 173 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 CSGALNACT2Q8N6G5 542 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 COPS5Q92905 334 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 PCMTD1Q96MG8 357 aaPredicted RBP12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 ERGIC2Q96RQ1 377 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 SELENOOQ9BVL4 669 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 EDEM3Q9BZQ6 932 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 TRIM6Q9C030 488 aaPredicted RBP12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 NHEJ1Q9H9Q4 299 aaPredicted RBP12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 SUGCTQ9HAC7 445 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 VAT1LQ9HCJ6 419 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 LUC7LQ9NQ29 371 aaKnown RBP12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 PNMA2Q9UL42 364 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 UMODL1Q5DID0 1318 aa12.67□□□□□ -0.38
CHRNB1-202ENST00000536404 DLL1O00548 723 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 EBAG9O00559 213 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 PHACTR2O75167 634 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 EPB41P11171 864 aaKnown RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 EDNRBP24530 442 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 CDC25AP30304 524 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 HNRNPH3P31942 346 aaKnown RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 MTIF2P46199 727 aaKnown RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 MRPL12P52815 198 aaKnown RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 PDE4DQ08499 809 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 PPIGQ13427 754 aaKnown RBP eCLIP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 TTI2Q6NXR4 508 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 CNNM4Q6P4Q7 775 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 IRF2BP1Q8IU81 584 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 TMEM199Q8N511 208 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 OR6J1Q8NGC5 347 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 P2RX5Q93086 422 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 CALR3Q96L12 384 aaKnown RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 LZTS2Q9BRK4 669 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 JADE2Q9NQC1 790 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 KBTBD4Q9NVX7 518 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 ETAA1Q9NY74 926 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 MCM8Q9UJA3 840 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 SNX12Q9UMY4 172 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 GDAQ9Y2T3 454 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 HYOU1Q9Y4L1 999 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 RNF225M0QZC1 329 aaPredicted RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 B4GALT4O60513 344 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 MYL3P08590 195 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 TRAF1Q13077 416 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 QRICH1Q2TAL8 776 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 WDR59Q6PJI9 974 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 ZNF365Q70YC5 407 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 B4GALNT4Q76KP1 1039 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 SRBD1Q8N5C6 995 aaKnown RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 C4orf32Q8N8J7 132 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 AENQ8WTP8 325 aaKnown RBP12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 PPP1R13LQ8WUF5 828 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 MYLIPQ8WY64 445 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 STAMQ92783 540 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 FAXDC2Q96IV6 333 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 MTRQ99707 1265 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 TTYH3Q9C0H2 523 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 LRRC27Q9C0I9 530 aa12.66□□□□□ -0.38
CHRNB1-202ENST00000536404 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms