RNA–Protein interactions for RNA: ENST00000536196.1

CHFR-212, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 597 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-212ENST00000536196 PDE12Q6L8Q7 609 aaKnown RBP23.43■■□□□ 1.34
CHFR-212ENST00000536196 RNF149Q8NC42 400 aa23.43■■□□□ 1.34
CHFR-212ENST00000536196 XPNPEP1Q9NQW7 623 aa23.43■■□□□ 1.34
CHFR-212ENST00000536196 PUF60Q9UHX1 559 aaKnown RBP23.43■■□□□ 1.34
CHFR-212ENST00000536196 LINC01565O15544 149 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 ST18O60284 1047 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 ZNF623O75123 536 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 TBX10O75333 385 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 NRIP1P48552 1158 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 NDUFV1P49821 464 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 DLX2Q07687 328 aaPredicted RBP23.42■■□□□ 1.34
CHFR-212ENST00000536196 ZNF174Q15697 407 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 NOSTRINQ8IVI9 506 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 EFHBQ8N7U6 833 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 MRPS27Q92552 414 aaKnown RBP23.42■■□□□ 1.34
CHFR-212ENST00000536196 MINDY3Q9H8M7 445 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 UPF2Q9HAU5 1272 aaKnown RBP23.42■■□□□ 1.34
CHFR-212ENST00000536196 PCDHGC5Q9Y5F6 944 aa23.42■■□□□ 1.34
CHFR-212ENST00000536196 OR52Z1P0C646 297 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 XRCC6P12956 609 aaKnown RBP eCLIP23.41■■□□□ 1.346e-7■■■■■ 28.8
CHFR-212ENST00000536196 TRAPPC10P48553 1259 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 RARRES1P49788 294 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 ERVFC1P60507 584 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 TFDP1Q14186 410 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 TTC38Q5R3I4 469 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 RBM23Q86U06 439 aaKnown RBP23.41■■□□□ 1.34
CHFR-212ENST00000536196 PIGOQ8TEQ8 1089 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 LPPQ93052 612 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 TLE6Q9H808 572 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 TUFT1Q9NNX1 390 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 SPG21Q9NZD8 308 aa23.41■■□□□ 1.34
CHFR-212ENST00000536196 NOL7Q9UMY1 257 aaKnown RBP23.41■■□□□ 1.34
CHFR-212ENST00000536196 FSD2A1L4K1 749 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 FSCN2O14926 492 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 PBX3P40426 434 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 TECP42680 631 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 KRT17Q04695 432 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 PCBP1Q15365 356 aaKnown RBP eCLIP23.4■■□□□ 1.34
CHFR-212ENST00000536196 CLUL1Q15846 466 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 GLB1LQ6UWU2 654 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 ERMNQ8TAM6 284 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 PGBD4Q96DM1 585 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 CD207Q9UJ71 328 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 PCDHB2Q9Y5E7 798 aa23.4■■□□□ 1.34
CHFR-212ENST00000536196 TDRD15B5MCY1 1934 aaKnown RBP23.39■■□□□ 1.34
CHFR-212ENST00000536196 ERLIN2O94905 339 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 SPATA31C1P0DKV0 1188 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 PTENP60484 403 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 POU5F1BQ06416 359 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 LONRF3Q496Y0 759 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 CATSPER3Q86XQ3 398 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 GJD3Q8N144 294 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 SLC39A11Q8N1S5 342 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 CDCA3Q99618 268 aaPredicted RBP23.39■■□□□ 1.33
CHFR-212ENST00000536196 POLR3CQ9BUI4 534 aaPredicted RBP23.39■■□□□ 1.33
CHFR-212ENST00000536196 CD320Q9NPF0 282 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 ENTPD7Q9NQZ7 604 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 PRKAG3Q9UGI9 489 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 KIF3AQ9Y496 699 aa23.39■■□□□ 1.33
CHFR-212ENST00000536196 CARNS1A5YM72 827 aa23.38■■□□□ 1.33
CHFR-212ENST00000536196 MBTPS2O43462 519 aa23.38■■□□□ 1.33
CHFR-212ENST00000536196 HOXA11P31270 313 aaPredicted RBP23.38■■□□□ 1.33
CHFR-212ENST00000536196 SSTR3P32745 418 aaPredicted RBP23.38■■□□□ 1.33
CHFR-212ENST00000536196 ARL2P36404 184 aa23.38■■□□□ 1.33
CHFR-212ENST00000536196 ALDH7A1P49419 539 aaKnown RBP23.38■■□□□ 1.33
CHFR-212ENST00000536196 SMAD4Q13485 552 aaKnown RBP23.38■■□□□ 1.33
CHFR-212ENST00000536196 NOMO2Q5JPE7 1267 aa23.38■■□□□ 1.33
CHFR-212ENST00000536196 PLPP4Q5VZY2 271 aa23.38■■□□□ 1.33
CHFR-212ENST00000536196 IFNLR1Q8IU57 520 aaPredicted RBP23.38■■□□□ 1.33
CHFR-212ENST00000536196 ASAP3Q8TDY4 903 aa23.38■■□□□ 1.33
CHFR-212ENST00000536196 TCF25Q9BQ70 676 aa23.38■■□□□ 1.33
CHFR-212ENST00000536196 C1QTNF1Q9BXJ1 281 aa23.38■■□□□ 1.33
CHFR-212ENST00000536196 NGRNQ9NPE2 291 aaKnown RBP23.38■■□□□ 1.33
CHFR-212ENST00000536196 INPP5FQ9Y2H2 1132 aa23.38■■□□□ 1.33
CHFR-212ENST00000536196 A0A087WWV3 80 aa23.37■■□□□ 1.33
CHFR-212ENST00000536196 MEIS3P2A8K0S8 358 aa23.37■■□□□ 1.33
CHFR-212ENST00000536196 USO1O60763 962 aaKnown RBP23.37■■□□□ 1.33
CHFR-212ENST00000536196 MED24O75448 989 aa23.37■■□□□ 1.33
CHFR-212ENST00000536196 U2AF2P26368 475 aaKnown RBP eCLIP23.37■■□□□ 1.33
CHFR-212ENST00000536196 AXLP30530 894 aa23.37■■□□□ 1.33
CHFR-212ENST00000536196 BCAR1P56945 870 aa23.37■■□□□ 1.33
CHFR-212ENST00000536196 CAPSQ13938 189 aa23.37■■□□□ 1.33
CHFR-212ENST00000536196 SMAD2Q15796 467 aaKnown RBP23.37■■□□□ 1.33
CHFR-212ENST00000536196 DUSP6Q16828 381 aa23.37■■□□□ 1.33
CHFR-212ENST00000536196 MRPL10Q7Z7H8 261 aaKnown RBP23.37■■□□□ 1.33
CHFR-212ENST00000536196 MSLNLQ96KJ4 702 aa23.37■■□□□ 1.33
CHFR-212ENST00000536196 NACC1Q96RE7 527 aa23.37■■□□□ 1.33
CHFR-212ENST00000536196 TBC1D13Q9NVG8 400 aa23.37■■□□□ 1.33
CHFR-212ENST00000536196 DBR1Q9UK59 544 aaKnown RBP23.37■■□□□ 1.33
CHFR-212ENST00000536196 CNTNAP2Q9UHC6 1331 aa23.36■■□□□ 1.33
CHFR-212ENST00000536196 INO80B-WBP1J3KQ70 363 aa23.36■■□□□ 1.33
CHFR-212ENST00000536196 PER2O15055 1255 aa23.36■■□□□ 1.33
CHFR-212ENST00000536196 ZC3H11AO75152 810 aaKnown RBP eCLIP23.36■■□□□ 1.33
CHFR-212ENST00000536196 OFD1O75665 1012 aa23.36■■□□□ 1.33
CHFR-212ENST00000536196 GLP2RO95838 553 aa23.36■■□□□ 1.33
CHFR-212ENST00000536196 GLRA2P23416 452 aa23.36■■□□□ 1.33
CHFR-212ENST00000536196 RPA1P27694 616 aa23.36■■□□□ 1.33
CHFR-212ENST00000536196 RNASELQ05823 741 aaKnown RBP23.36■■□□□ 1.33
CHFR-212ENST00000536196 NCBP1Q09161 790 aaKnown RBP23.36■■□□□ 1.33
CHFR-212ENST00000536196 UBXN11Q5T124 520 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms