RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 MFSD14AQ96MC6 490 aa13.63□□□□□ -0.23
CCND1-202ENST00000535993 COL4A3BPQ9Y5P4 624 aa13.63□□□□□ -0.23
CCND1-202ENST00000535993 PLXNA4Q9HCM2 1894 aa13.63□□□□□ -0.23
CCND1-202ENST00000535993 GAS2O43903 313 aaKnown RBP13.62□□□□□ -0.23
CCND1-202ENST00000535993 ZNF623O75123 536 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 LARGE1O95461 756 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 YWHABP31946 246 aaKnown RBP13.62□□□□□ -0.23
CCND1-202ENST00000535993 KRT2P35908 639 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 NPEPPSP55786 919 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 BCAR1P56945 870 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 KCNC3Q14003 757 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 ME3Q16798 604 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 NCAPH2Q6IBW4 605 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 SRGAP1Q7Z6B7 1085 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 KSR1Q8IVT5 923 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 C4orf19Q8IY42 314 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 MRPL43Q8N983 215 aaKnown RBP13.62□□□□□ -0.23
CCND1-202ENST00000535993 TMEM87AQ8NBN3 555 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 OXER1Q8TDS5 423 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 TCP11Q8WWU5 503 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 HAS1Q92839 578 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 RPGRIP1Q96KN7 1286 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 LXNQ9BS40 222 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 KCNH6Q9H252 994 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 DHX33Q9H6R0 707 aaKnown RBP13.62□□□□□ -0.23
CCND1-202ENST00000535993 ZSWIM4Q9H7M6 989 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 IFT122Q9HBG6 1241 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 FAM105AQ9NUU6 356 aa13.62□□□□□ -0.23
CCND1-202ENST00000535993 C2orf71A6NGG8 1288 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 ASAP2O43150 1006 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 ZC3H11AO75152 810 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCND1-202ENST00000535993 CTDNEP1O95476 244 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 SRGAP2CP0DJJ0 459 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 HOXD11P31277 338 aaPredicted RBP13.61□□□□□ -0.23
CCND1-202ENST00000535993 CA8P35219 290 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 RNASELQ05823 741 aaKnown RBP13.61□□□□□ -0.23
CCND1-202ENST00000535993 GIT2Q14161 759 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 TPRNQ4KMQ1 711 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 NOMO2Q5JPE7 1267 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 HFE2Q6ZVN8 426 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 PRPF31Q8WWY3 499 aaKnown RBP13.61□□□□□ -0.23
CCND1-202ENST00000535993 LPPQ93052 612 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 GTF3C6Q969F1 213 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 TMEM143Q96AN5 459 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 S1PR5Q9H228 398 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 GJB4Q9NTQ9 266 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 AGPAT5Q9NUQ2 364 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 INPP5FQ9Y2H2 1132 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 PCDHB2Q9Y5E7 798 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 C5orf42Q9H799 3197 aa13.61□□□□□ -0.23
CCND1-202ENST00000535993 NT5C1B-RDH14C9J2C7 533 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 OFD1O75665 1012 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 CXCL14O95715 111 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 ZXDAP98168 799 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 LAMTOR4Q0VGL1 99 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 EMC2Q15006 297 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 PCBP1Q15365 356 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCND1-202ENST00000535993 LONRF3Q496Y0 759 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 XKR9Q5GH70 373 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 CES5AQ6NT32 575 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 SYCE2Q6PIF2 218 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 TRIM67Q6ZTA4 783 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 DDX53Q86TM3 631 aaKnown RBP13.6□□□□□ -0.23
CCND1-202ENST00000535993 TPH2Q8IWU9 490 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 VPS52Q8N1B4 723 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
CCND1-202ENST00000535993 URGCPQ8TCY9 931 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 IGSF21Q96ID5 467 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 DYDC2Q96IM9 177 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 NECTIN4Q96NY8 510 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 BACH2Q9BYV9 841 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 TBC1D13Q9NVG8 400 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 RGL1Q9NZL6 768 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 WRAP73Q9P2S5 460 aaPredicted RBP13.6□□□□□ -0.23
CCND1-202ENST00000535993 STK39Q9UEW8 545 aa13.6□□□□□ -0.23
CCND1-202ENST00000535993 CLASP2O75122 1294 aaKnown RBP13.59□□□□□ -0.23
CCND1-202ENST00000535993 GALTP07902 379 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 CYP4A11Q02928 519 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 ITIH3Q06033 890 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 NCBP1Q09161 790 aaKnown RBP13.59□□□□□ -0.23
CCND1-202ENST00000535993 NR5A1Q13285 461 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 TRIM29Q14134 588 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 CTTNQ14247 550 aaKnown RBP13.59□□□□□ -0.23
CCND1-202ENST00000535993 MXD4Q14582 209 aaPredicted RBP13.59□□□□□ -0.23
CCND1-202ENST00000535993 RABEP1Q15276 862 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 EARS2Q5JPH6 523 aaKnown RBP13.59□□□□□ -0.23
CCND1-202ENST00000535993 FERMT3Q86UX7 667 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 NECAB1Q8N987 351 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 RNF149Q8NC42 400 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 MTRQ99707 1265 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 APOL5Q9BWW9 433 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 NRDE2Q9H7Z3 1164 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 HCFC2Q9Y5Z7 792 aa13.59□□□□□ -0.23
CCND1-202ENST00000535993 IRAK3Q9Y616 596 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms