RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 CSDE1O75534 798 aaKnown RBP22.7■■□□□ 1.22
CHFR-209ENST00000535181 PLS3P13797 630 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 PFKFB1P16118 471 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 EFNA5P52803 228 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 GIT2Q14161 759 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 DHX8Q14562 1220 aaKnown RBP22.7■■□□□ 1.22
CHFR-209ENST00000535181 FAM187BQ17R55 369 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 CSPP1Q1MSJ5 1256 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 PPP4R3CPQ6ZMV5 832 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 DEPTORQ8TB45 409 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 SPIRE2Q8WWL2 714 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 KCNN1Q92952 543 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 DHX58Q96C10 678 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 PRIMPOLQ96LW4 560 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 TRAIPQ9BWF2 469 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 LRRC27Q9C0I9 530 aa22.7■■□□□ 1.22
CHFR-209ENST00000535181 LARSQ9P2J5 1176 aaKnown RBP22.7■■□□□ 1.22
CHFR-209ENST00000535181 ADGRA3Q8IWK6 1321 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 DENND3A2RUS2 1198 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 RBAK-RBAKDNI3L0D1 243 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 INO80B-WBP1J3KQ70 363 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 KRT18P05783 430 aaKnown RBP22.69■■□□□ 1.22
CHFR-209ENST00000535181 ZSCAN20P17040 1043 aaPredicted RBP22.69■■□□□ 1.22
CHFR-209ENST00000535181 FGFR4P22455 802 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 AXLP30530 894 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 NPTX2P47972 431 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 PEX3P56589 373 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 RAD51AP2Q09MP3 1159 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 AMHR2Q16671 573 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 HERC6Q8IVU3 1022 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 MRPS27Q92552 414 aaKnown RBP22.69■■□□□ 1.22
CHFR-209ENST00000535181 TOP1MTQ969P6 601 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 ADAM2Q99965 735 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 CCDC113Q9H0I3 377 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 FZD8Q9H461 694 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 POLD4Q9HCU8 107 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 PRMT7Q9NVM4 692 aaPredicted RBP22.69■■□□□ 1.22
CHFR-209ENST00000535181 RNF216Q9NWF9 866 aaPredicted RBP22.69■■□□□ 1.22
CHFR-209ENST00000535181 DACT1Q9NYF0 836 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 ARHGAP28Q9P2N2 729 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 USP25Q9UHP3 1055 aa22.69■■□□□ 1.22
CHFR-209ENST00000535181 NPHP3-ACAD11A0A0J9YXS1 232 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 MYMKA6NI61 221 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 C9IYK1 514 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 ERLIN2O94905 339 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 GJB5O95377 273 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 SCP2P22307 547 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 FAM109BQ6ICB4 259 aaPredicted RBP22.68■■□□□ 1.22
CHFR-209ENST00000535181 CNNM4Q6P4Q7 775 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 SLC24A5Q71RS6 500 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 MYOCDQ8IZQ8 938 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 CRIPAKQ8N1N5 446 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 DDX12PQ92771 950 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 CCDC51Q96ER9 411 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 PARVGQ9HBI0 331 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 COL4A6Q14031 1691 aa22.68■■□□□ 1.22
CHFR-209ENST00000535181 A0A1B0GVL5 298 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 TSPAN1O60635 241 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 TBCAO75347 108 aaKnown RBP22.67■■□□□ 1.22
CHFR-209ENST00000535181 HOXA11P31270 313 aaPredicted RBP22.67■■□□□ 1.22
CHFR-209ENST00000535181 SARSP49591 514 aaKnown RBP22.67■■□□□ 1.22
CHFR-209ENST00000535181 SMTNP53814 917 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 FAM189BP81408 668 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 AMPD3Q01432 767 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 MAPK6Q16659 721 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 NPAS4Q8IUM7 802 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 TMEM87AQ8NBN3 555 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 DNAJC19Q96DA6 116 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 TMEM134Q9H6X4 195 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 KMT5AQ9NQR1 393 aa22.67■■□□□ 1.22
CHFR-209ENST00000535181 PIN4Q9Y237 131 aaKnown RBP22.67■■□□□ 1.22
CHFR-209ENST00000535181 CNTNAP2Q9UHC6 1331 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 CCDC169A6NNP5 214 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 SFI1A8K8P3 1242 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 H0YCG3 227 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 FAM13AO94988 1023 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 SLFN14P0C7P3 912 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 NCKAP1LP55160 1127 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 CACNB1Q02641 598 aaPredicted RBP22.66■■□□□ 1.22
CHFR-209ENST00000535181 NCBP1Q09161 790 aaKnown RBP22.66■■□□□ 1.22
CHFR-209ENST00000535181 RAB30Q15771 203 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 CLEC17AQ6ZS10 378 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 FSIP1Q8NA03 581 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 KIFC3Q9BVG8 833 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 ELAC1Q9H777 363 aaKnown RBP22.66■■□□□ 1.22
CHFR-209ENST00000535181 PCDHA11Q9Y5I1 949 aa22.66■■□□□ 1.22
CHFR-209ENST00000535181 GBF1Q92538 1859 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 A0A0U1RQF3 1178 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 FRMD3A2A2Y4 597 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 GRXCR1A8MXD5 290 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 ACKR2O00590 384 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 ACTN4O43707 911 aaKnown RBP22.65■■□□□ 1.22
CHFR-209ENST00000535181 STAG3L1P0CL83 205 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 SYKP43405 635 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 NDUFA8P51970 172 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 HTRA4P83105 476 aaPredicted RBP22.65■■□□□ 1.22
CHFR-209ENST00000535181 GPR153Q6NV75 609 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 NOTUMQ6P988 496 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 CEP57L1Q8IYX8 460 aa22.65■■□□□ 1.22
CHFR-209ENST00000535181 SLC17A8Q8NDX2 589 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms