RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ESYT2A0FGR8 921 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 ZNF131P52739 623 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.11■□□□□ 0.331e-6■■■■■ 56.2
MCF2L-232ENST00000535094 C9orf72Q96LT7 481 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 EIF2AK1Q9BQI3 630 aaKnown RBP17.11■□□□□ 0.33
MCF2L-232ENST00000535094 CCDC77Q9BR77 488 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 TRIM7Q9C029 511 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 DAGLAQ9Y4D2 1042 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 CERKLQ49MI3 558 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-232ENST00000535094 LRRC57Q8N9N7 239 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 ARHGEF1Q92888 912 aaKnown RBP17.11■□□□□ 0.33
MCF2L-232ENST00000535094 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-232ENST00000535094 PLVAPQ9BX97 442 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 AMNQ9BXJ7 453 aa17.11■□□□□ 0.33
MCF2L-232ENST00000535094 CHD4Q14839 1912 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 IFNB1P01574 187 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 ICA1Q05084 483 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 PLCB4Q15147 1175 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 EPHA7Q15375 998 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 NAP1L4Q99733 375 aaKnown RBP17.1■□□□□ 0.33
MCF2L-232ENST00000535094 PARP2Q9UGN5 583 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 HIP1RO75146 1068 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 PDHA1P08559 390 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 ERMARDQ5T6L9 678 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 FBF1Q8TES7 1133 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 MTFR1LQ9H019 292 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 DONSONQ9NYP3 566 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 NOP53Q9NZM5 478 aaKnown RBP17.1■□□□□ 0.33
MCF2L-232ENST00000535094 EMSYQ7Z589 1322 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 CREB1P16220 341 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 TAF11Q15544 211 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 PPP2R5EQ16537 467 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 FMNL3Q8IVF7 1028 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 PWWP2AQ96N64 755 aa17.1■□□□□ 0.33
MCF2L-232ENST00000535094 TGS1Q96RS0 853 aaKnown RBP17.1■□□□□ 0.33
MCF2L-232ENST00000535094 A8MUI8 341 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 H0YGN5 161 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 hCG_1984214I3L0E3 225 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 CBWD6Q4V339 395 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 CBWD3Q5JTY5 395 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 CBWD5Q5RIA9 395 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 UBAP2Q5T6F2 1119 aaKnown RBP17.09■□□□□ 0.33
MCF2L-232ENST00000535094 ZNF713Q8N859 430 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-232ENST00000535094 NARFQ9UHQ1 456 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 TRPC6Q9Y210 931 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 NFS1Q9Y697 457 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 CYP26A1O43174 497 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 ECHS1P30084 290 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 PTENP60484 403 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 DDR1Q08345 913 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 STK33Q9BYT3 514 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 VPS37BQ9H9H4 285 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 TTC7AQ9ULT0 858 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-232ENST00000535094 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-232ENST00000535094 LRP6O75581 1613 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 TISP43B9A030 160 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 PPP4CP60510 307 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 ZBTB16Q05516 673 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 RNF207Q6ZRF8 634 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 CPNE8Q86YQ8 564 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 AGPAT1Q99943 283 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 NUP85Q9BW27 656 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 PNMA3Q9UL41 463 aa17.09■□□□□ 0.33
MCF2L-232ENST00000535094 USP15Q9Y4E8 981 aaPredicted RBP17.09■□□□□ 0.33
MCF2L-232ENST00000535094 CALCAP01258 141 aa17.08■□□□□ 0.33
MCF2L-232ENST00000535094 ORC2Q13416 577 aaPredicted RBP17.08■□□□□ 0.33
MCF2L-232ENST00000535094 FAM196AQ6ZSG2 479 aa17.08■□□□□ 0.33
MCF2L-232ENST00000535094 PITPNM3Q9BZ71 974 aa17.08■□□□□ 0.33
MCF2L-232ENST00000535094 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 GPR75-ASB3A0A0A6YYF3 556 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 TCRBV7S2A1N4TA0A589 114 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 GPC5P78333 572 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 SLMAPQ14BN4 828 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 NAIF1Q69YI7 327 aaPredicted RBP17.08■□□□□ 0.32
MCF2L-232ENST00000535094 AGAP11Q8TF27 550 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 CCT6BQ92526 530 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 MIEF2Q96C03 454 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 MCM8Q9UJA3 840 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 SYNGAP1Q96PV0 1343 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 SORBS3O60504 671 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 TMEM253P0C7T8 217 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 ATF2P15336 505 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 CHRNA3P32297 505 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 KRT17Q04695 432 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 C6orf89Q6UWU4 347 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 KAT5Q92993 513 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 BICD1Q96G01 975 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 CARD9Q9H257 536 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 HOMER2Q9NSB8 354 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 APEX2Q9UBZ4 518 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 ANAPC5Q9UJX4 755 aa17.08■□□□□ 0.32
MCF2L-232ENST00000535094 FAM187AA6NFU0 413 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 PHF2O75151 1096 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 GAS8O95995 478 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 GSCP56915 257 aaPredicted RBP17.07■□□□□ 0.32
MCF2L-232ENST00000535094 KDM4CQ9H3R0 1056 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.07■□□□□ 0.32
MCF2L-232ENST00000535094 AGTP01019 485 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 PYGMP11217 842 aa17.07■□□□□ 0.32
MCF2L-232ENST00000535094 CTNNA2P26232 953 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms