RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 PIN4Q9Y237 131 aaKnown RBP21.05■□□□□ 0.96
NDUFS3-213ENST00000534716 CARNS1A5YM72 827 aa21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 RAB27AP51159 221 aa21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 LAMTOR4Q0VGL1 99 aa21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 TWF2Q6IBS0 349 aaKnown RBP21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 CATSPER4Q7RTX7 472 aa21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 SRGAP1Q7Z6B7 1085 aa21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 SLC39A11Q8N1S5 342 aa21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 TCP11Q8WWU5 503 aa21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 MTMR9Q96QG7 549 aa21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 AGPAT5Q9NUQ2 364 aa21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 ARIH1Q9Y4X5 557 aaPredicted RBP21.04■□□□□ 0.96
NDUFS3-213ENST00000534716 TRIM29Q14134 588 aa21.03■□□□□ 0.96
NDUFS3-213ENST00000534716 PCBP1Q15365 356 aaKnown RBP eCLIP21.03■□□□□ 0.96
NDUFS3-213ENST00000534716 CALCRLQ16602 461 aa21.03■□□□□ 0.96
NDUFS3-213ENST00000534716 TMEM143Q96AN5 459 aa21.03■□□□□ 0.96
NDUFS3-213ENST00000534716 TCF25Q9BQ70 676 aa21.03■□□□□ 0.96
NDUFS3-213ENST00000534716 EIF2AK1Q9BQI3 630 aaKnown RBP21.03■□□□□ 0.96
NDUFS3-213ENST00000534716 FAM105AQ9NUU6 356 aa21.03■□□□□ 0.96
NDUFS3-213ENST00000534716 LIMCH1Q9UPQ0 1083 aa21.03■□□□□ 0.96
NDUFS3-213ENST00000534716 PER2O15055 1255 aa21.02■□□□□ 0.96
NDUFS3-213ENST00000534716 NEMFO60524 1076 aa21.02■□□□□ 0.96
NDUFS3-213ENST00000534716 POU5F1BQ06416 359 aa21.02■□□□□ 0.96
NDUFS3-213ENST00000534716 CTTNQ14247 550 aaKnown RBP21.02■□□□□ 0.96
NDUFS3-213ENST00000534716 EMC2Q15006 297 aa21.02■□□□□ 0.96
NDUFS3-213ENST00000534716 XKR9Q5GH70 373 aa21.02■□□□□ 0.96
NDUFS3-213ENST00000534716 VN1R2Q8NFZ6 395 aa21.02■□□□□ 0.96
NDUFS3-213ENST00000534716 TTC12Q9H892 705 aaPredicted RBP21.02■□□□□ 0.96
NDUFS3-213ENST00000534716 ANKEF1Q9NU02 776 aa21.02■□□□□ 0.96
NDUFS3-213ENST00000534716 BARX2Q9UMQ3 279 aaPredicted RBP21.02■□□□□ 0.96
NDUFS3-213ENST00000534716 PRR33A8MZF0 331 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 WNT7AO00755 349 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 ZBTB39O15060 712 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 DCXO43602 365 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 HOXA11P31270 313 aaPredicted RBP21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 PBX3P40426 434 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 ALDH7A1P49419 539 aaKnown RBP21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 BCAR1P56945 870 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 CYP4A11Q02928 519 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 MXD4Q14582 209 aaPredicted RBP21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 PLPP4Q5VZY2 271 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 GLB1LQ6UWU2 654 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 MRPL10Q7Z7H8 261 aaKnown RBP21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 FERMT3Q86UX7 667 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 TPH2Q8IWU9 490 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 PGBD4Q96DM1 585 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 MTRQ99707 1265 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 LLPHQ9BRT6 129 aaKnown RBP21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 MINDY3Q9H8M7 445 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 ENTPD7Q9NQZ7 604 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 HCN4Q9Y3Q4 1203 aa21.01■□□□□ 0.95
NDUFS3-213ENST00000534716 OFD1O75665 1012 aa21■□□□□ 0.95
NDUFS3-213ENST00000534716 SRGAP2CP0DJJ0 459 aa21■□□□□ 0.95
NDUFS3-213ENST00000534716 XRCC6P12956 609 aaKnown RBP eCLIP21■□□□□ 0.95
NDUFS3-213ENST00000534716 NOMO2Q5JPE7 1267 aa21■□□□□ 0.95
NDUFS3-213ENST00000534716 IFNLR1Q8IU57 520 aaPredicted RBP21■□□□□ 0.95
NDUFS3-213ENST00000534716 MRPL43Q8N983 215 aaKnown RBP21■□□□□ 0.95
NDUFS3-213ENST00000534716 SUSD6Q92537 303 aa21■□□□□ 0.95
NDUFS3-213ENST00000534716 XPNPEP1Q9NQW7 623 aa21■□□□□ 0.95
NDUFS3-213ENST00000534716 USP15Q9Y4E8 981 aaPredicted RBP21■□□□□ 0.95
NDUFS3-213ENST00000534716 PCDHB2Q9Y5E7 798 aa21■□□□□ 0.95
NDUFS3-213ENST00000534716 HIDE1A8MVS5 230 aa20.99■□□□□ 0.95
NDUFS3-213ENST00000534716 DGAT1O75907 488 aa20.99■□□□□ 0.95
NDUFS3-213ENST00000534716 SRGAP2BP0DMP2 458 aa20.99■□□□□ 0.95
NDUFS3-213ENST00000534716 UBXN11Q5T124 520 aa20.99■□□□□ 0.95
NDUFS3-213ENST00000534716 TMC7Q7Z402 723 aa20.99■□□□□ 0.95
NDUFS3-213ENST00000534716 RNF149Q8NC42 400 aa20.99■□□□□ 0.95
NDUFS3-213ENST00000534716 LPPQ93052 612 aa20.99■□□□□ 0.95
NDUFS3-213ENST00000534716 TBC1D13Q9NVG8 400 aa20.99■□□□□ 0.95
NDUFS3-213ENST00000534716 FAM86C2PA6NEL3 165 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 C2orf71A6NGG8 1288 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 MEIS3P2A8K0S8 358 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 LOC730098B7Z3J9 87 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 AXLP30530 894 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 TXKP42681 527 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 PTENP60484 403 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 RBM10P98175 930 aaKnown RBP20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 ORC2Q13416 577 aaPredicted RBP20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 SMC1AQ14683 1233 aaKnown RBP20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 CBX2Q14781 532 aaPredicted RBP20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 SAFBQ15424 915 aaKnown RBP eCLIP20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 HERC4Q5GLZ8 1057 aaPredicted RBP20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 AGMOQ6ZNB7 445 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 NFKBIZQ9BYH8 718 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 S1PR5Q9H228 398 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 CNTNAP2Q9UHC6 1331 aa20.98■□□□□ 0.95
NDUFS3-213ENST00000534716 HOXB8P17481 243 aaPredicted RBP20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 RARRES1P49788 294 aa20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 ANKRD54Q6NXT1 300 aa20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 DDX53Q86TM3 631 aaKnown RBP20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 CNNM3Q8NE01 707 aa20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 CCDC51Q96ER9 411 aa20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 TMEM169Q96HH4 297 aa20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 IGSF21Q96ID5 467 aa20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 ZSCAN31Q96LW9 406 aaPredicted RBP20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 PHF7Q9BWX1 381 aaPredicted RBP20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 TMEM60Q9H2L4 133 aa20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 FOXP1Q9H334 677 aaPredicted RBP20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 NRDE2Q9H7Z3 1164 aa20.97■□□□□ 0.95
NDUFS3-213ENST00000534716 BMP2KQ9NSY1 1161 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms