RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 PPM1AP35813 382 aa25.94■■□□□ 1.74
YIF1A-213ENST00000534374 RARRES1P49788 294 aa25.94■■□□□ 1.74
YIF1A-213ENST00000534374 ZNF174Q15697 407 aa25.94■■□□□ 1.74
YIF1A-213ENST00000534374 RNF149Q8NC42 400 aa25.94■■□□□ 1.74
YIF1A-213ENST00000534374 HELQQ8TDG4 1101 aa25.94■■□□□ 1.74
YIF1A-213ENST00000534374 MRPS27Q92552 414 aaKnown RBP25.94■■□□□ 1.74
YIF1A-213ENST00000534374 ZNF558Q96NG5 402 aa25.94■■□□□ 1.74
YIF1A-213ENST00000534374 TUFT1Q9NNX1 390 aa25.94■■□□□ 1.74
YIF1A-213ENST00000534374 CARNS1A5YM72 827 aa25.93■■□□□ 1.74
YIF1A-213ENST00000534374 POTEMA6NI47 508 aa25.93■■□□□ 1.74
YIF1A-213ENST00000534374 U2AF2P26368 475 aaKnown RBP eCLIP25.93■■□□□ 1.74
YIF1A-213ENST00000534374 GTF2F1P35269 517 aaKnown RBP eCLIP25.93■■□□□ 1.74
YIF1A-213ENST00000534374 KRT17Q04695 432 aa25.93■■□□□ 1.74
YIF1A-213ENST00000534374 GNL2Q13823 731 aaKnown RBP25.93■■□□□ 1.74
YIF1A-213ENST00000534374 CATSPER3Q86XQ3 398 aa25.93■■□□□ 1.74
YIF1A-213ENST00000534374 EFHBQ8N7U6 833 aa25.93■■□□□ 1.74
YIF1A-213ENST00000534374 POLR3CQ9BUI4 534 aaPredicted RBP25.93■■□□□ 1.74
YIF1A-213ENST00000534374 MINDY3Q9H8M7 445 aa25.93■■□□□ 1.74
YIF1A-213ENST00000534374 UPF2Q9HAU5 1272 aaKnown RBP25.93■■□□□ 1.74
YIF1A-213ENST00000534374 BMP2KQ9NSY1 1161 aaPredicted RBP25.93■■□□□ 1.74
YIF1A-213ENST00000534374 PLXNA4Q9HCM2 1894 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 CSPG5O95196 566 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 OR52Z1P0C646 297 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 IL9P15248 144 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 HOXA11P31270 313 aaPredicted RBP25.92■■□□□ 1.74
YIF1A-213ENST00000534374 ARL2P36404 184 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 TECP42680 631 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 PTENP60484 403 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 ERVFC1P60507 584 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 DLX2Q07687 328 aaPredicted RBP25.92■■□□□ 1.74
YIF1A-213ENST00000534374 TFDP1Q14186 410 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 TTC38Q5R3I4 469 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 MRPL10Q7Z7H8 261 aaKnown RBP25.92■■□□□ 1.74
YIF1A-213ENST00000534374 ADGRD2Q7Z7M1 963 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 IFNLR1Q8IU57 520 aaPredicted RBP25.92■■□□□ 1.74
YIF1A-213ENST00000534374 PGBD4Q96DM1 585 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 CCDC43Q96MW1 224 aaKnown RBP25.92■■□□□ 1.74
YIF1A-213ENST00000534374 SPG21Q9NZD8 308 aa25.92■■□□□ 1.74
YIF1A-213ENST00000534374 NOL7Q9UMY1 257 aaKnown RBP25.92■■□□□ 1.74
YIF1A-213ENST00000534374 FSD2A1L4K1 749 aa25.91■■□□□ 1.74
YIF1A-213ENST00000534374 FSCN2O14926 492 aa25.91■■□□□ 1.74
YIF1A-213ENST00000534374 GLB1LQ6UWU2 654 aa25.91■■□□□ 1.74
YIF1A-213ENST00000534374 ERMNQ8TAM6 284 aa25.91■■□□□ 1.74
YIF1A-213ENST00000534374 PIGOQ8TEQ8 1089 aa25.91■■□□□ 1.74
YIF1A-213ENST00000534374 NACC1Q96RE7 527 aa25.91■■□□□ 1.74
YIF1A-213ENST00000534374 CDCA3Q99618 268 aaPredicted RBP25.91■■□□□ 1.74
YIF1A-213ENST00000534374 TLE6Q9H808 572 aa25.91■■□□□ 1.74
YIF1A-213ENST00000534374 NGRNQ9NPE2 291 aaKnown RBP25.91■■□□□ 1.74
YIF1A-213ENST00000534374 KIF3AQ9Y496 699 aa25.91■■□□□ 1.74
YIF1A-213ENST00000534374 PCDHB2Q9Y5E7 798 aa25.91■■□□□ 1.74
YIF1A-213ENST00000534374 RPA1P27694 616 aa25.9■■□□□ 1.74
YIF1A-213ENST00000534374 AXLP30530 894 aa25.9■■□□□ 1.74
YIF1A-213ENST00000534374 NRIP1P48552 1158 aa25.9■■□□□ 1.74
YIF1A-213ENST00000534374 ALDH7A1P49419 539 aaKnown RBP25.9■■□□□ 1.74
YIF1A-213ENST00000534374 C4orf32Q8N8J7 132 aa25.9■■□□□ 1.74
YIF1A-213ENST00000534374 NFKBIZQ9BYH8 718 aa25.9■■□□□ 1.74
YIF1A-213ENST00000534374 PRKAG3Q9UGI9 489 aa25.9■■□□□ 1.74
YIF1A-213ENST00000534374 DBR1Q9UK59 544 aaKnown RBP25.9■■□□□ 1.74
YIF1A-213ENST00000534374 ARID2Q68CP9 1835 aa25.89■■□□□ 1.74
YIF1A-213ENST00000534374 LINC01565O15544 149 aa25.89■■□□□ 1.74
YIF1A-213ENST00000534374 OFD1O75665 1012 aa25.89■■□□□ 1.74
YIF1A-213ENST00000534374 MUTP22033 750 aa25.89■■□□□ 1.74
YIF1A-213ENST00000534374 NCBP1Q09161 790 aaKnown RBP25.89■■□□□ 1.74
YIF1A-213ENST00000534374 RBM23Q86U06 439 aaKnown RBP25.89■■□□□ 1.74
YIF1A-213ENST00000534374 GJD3Q8N144 294 aa25.89■■□□□ 1.74
YIF1A-213ENST00000534374 SLC39A11Q8N1S5 342 aa25.89■■□□□ 1.74
YIF1A-213ENST00000534374 LPPQ93052 612 aa25.89■■□□□ 1.74
YIF1A-213ENST00000534374 TBX10O75333 385 aa25.88■■□□□ 1.73
YIF1A-213ENST00000534374 MED24O75448 989 aa25.88■■□□□ 1.73
YIF1A-213ENST00000534374 NDUFV1P49821 464 aa25.88■■□□□ 1.73
YIF1A-213ENST00000534374 BCAR1P56945 870 aa25.88■■□□□ 1.73
YIF1A-213ENST00000534374 NOMO2Q5JPE7 1267 aa25.88■■□□□ 1.73
YIF1A-213ENST00000534374 CNNM3Q8NE01 707 aa25.88■■□□□ 1.73
YIF1A-213ENST00000534374 MSLNLQ96KJ4 702 aa25.88■■□□□ 1.73
YIF1A-213ENST00000534374 CD320Q9NPF0 282 aa25.88■■□□□ 1.73
YIF1A-213ENST00000534374 CD207Q9UJ71 328 aa25.88■■□□□ 1.73
YIF1A-213ENST00000534374 PCDHGC5Q9Y5F6 944 aa25.88■■□□□ 1.73
YIF1A-213ENST00000534374 A0A087WWV3 80 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 ERLIN2O94905 339 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 EYA4O95677 639 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 GLRA2P23416 452 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 MCM2P49736 904 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 FXR2P51116 673 aaKnown RBP eCLIP25.87■■□□□ 1.73
YIF1A-213ENST00000534374 SMAD4Q13485 552 aaKnown RBP25.87■■□□□ 1.73
YIF1A-213ENST00000534374 PDIA5Q14554 519 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 SMAD2Q15796 467 aaKnown RBP25.87■■□□□ 1.73
YIF1A-213ENST00000534374 DUSP6Q16828 381 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 UBXN11Q5T124 520 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 MCPH1Q8NEM0 835 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 ASAP3Q8TDY4 903 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 CCDC51Q96ER9 411 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 TMX3Q96JJ7 454 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 CLEC1BQ9P126 229 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 KANSL3Q9P2N6 904 aa25.87■■□□□ 1.73
YIF1A-213ENST00000534374 MEIS3P2A8K0S8 358 aa25.86■■□□□ 1.73
YIF1A-213ENST00000534374 INO80B-WBP1J3KQ70 363 aa25.86■■□□□ 1.73
YIF1A-213ENST00000534374 MBTPS2O43462 519 aa25.86■■□□□ 1.73
YIF1A-213ENST00000534374 NCLP19338 710 aaKnown RBP25.86■■□□□ 1.73
YIF1A-213ENST00000534374 PBX3P40426 434 aa25.86■■□□□ 1.73
YIF1A-213ENST00000534374 TOB1P50616 345 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms