RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 DGAT1O75907 488 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 SRGAP2CP0DJJ0 459 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 TXKP42681 527 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 NRIP1P48552 1158 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 ALDH7A1P49419 539 aaKnown RBP14.94□□□□□ -0.02
CAPN1-228ENST00000534373 ERVFC1P60507 584 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 CYP4A11Q02928 519 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 COASYQ13057 564 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 EMC2Q15006 297 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 ADGRD2Q7Z7M1 963 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 FERMT3Q86UX7 667 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 CCDC83Q8IWF9 413 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 HELQQ8TDG4 1101 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 TMEM143Q96AN5 459 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 POP1Q99575 1024 aaKnown RBP14.94□□□□□ -0.02
CAPN1-228ENST00000534373 MTRQ99707 1265 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 EPHX3Q9H6B9 360 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 HCSTQ9UBK5 93 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 ATG2AQ2TAZ0 1938 aa14.94□□□□□ -0.02
CAPN1-228ENST00000534373 ZBTB39O15060 712 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 LINC01565O15544 149 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 GPR37L1O60883 481 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 CSPG5O95196 566 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 ALADP13716 330 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 AXLP30530 894 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 SSTR3P32745 418 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-228ENST00000534373 RBM25P49756 843 aaKnown RBP14.93□□□□□ -0.02
CAPN1-228ENST00000534373 ZP2Q05996 745 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 NCBP1Q09161 790 aaKnown RBP14.93□□□□□ -0.02
CAPN1-228ENST00000534373 TFDP1Q14186 410 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 BMS1Q14692 1282 aaKnown RBP14.93□□□□□ -0.02
CAPN1-228ENST00000534373 DUSP6Q16828 381 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 GLB1LQ6UWU2 654 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 TMEM184AQ6ZMB5 413 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 MRPL10Q7Z7H8 261 aaKnown RBP14.93□□□□□ -0.02
CAPN1-228ENST00000534373 RBM23Q86U06 439 aaKnown RBP14.93□□□□□ -0.02
CAPN1-228ENST00000534373 IFNLR1Q8IU57 520 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-228ENST00000534373 RNF149Q8NC42 400 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 CNNM3Q8NE01 707 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 FBXO18Q8NFZ0 1043 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 KIF2CQ99661 725 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 CLEC1BQ9P126 229 aa14.93□□□□□ -0.02
CAPN1-228ENST00000534373 SRGAP2BP0DMP2 458 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 COL9A1P20849 921 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 HOXA11P31270 313 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-228ENST00000534373 TRAPPC10P48553 1259 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 RARRES1P49788 294 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 BCAR1P56945 870 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 C8orf34Q49A92 452 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 NOMO2Q5JPE7 1267 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 TMEM31Q5JXX7 168 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 SLC39A11Q8N1S5 342 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 FAM184AQ8NB25 1140 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 SMRP1Q8NCR6 262 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 TCF25Q9BQ70 676 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 NFKBIZQ9BYH8 718 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 MINDY3Q9H8M7 445 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 TUFT1Q9NNX1 390 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 UBN1Q9NPG3 1134 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 XPNPEP1Q9NQW7 623 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 KANSL3Q9P2N6 904 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 STK39Q9UEW8 545 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 PCDHB2Q9Y5E7 798 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 PLXNA4Q9HCM2 1894 aa14.92□□□□□ -0.02
CAPN1-228ENST00000534373 WNT7AO00755 349 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 OFD1O75665 1012 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 GLP2RO95838 553 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 MUTP22033 750 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 MCM7P33993 719 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 ARL2P36404 184 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 FOSBP53539 338 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 PTENP60484 403 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 KCNC3Q14003 757 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 TMC7Q7Z402 723 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 MRPL43Q8N983 215 aaKnown RBP14.91□□□□□ -0.02
CAPN1-228ENST00000534373 KHSRPQ92945 711 aaKnown RBP eCLIP14.91□□□□□ -0.02
CAPN1-228ENST00000534373 CCDC51Q96ER9 411 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 TMEM169Q96HH4 297 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 CCDC43Q96MW1 224 aaKnown RBP14.91□□□□□ -0.02
CAPN1-228ENST00000534373 NACC1Q96RE7 527 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 POLR3CQ9BUI4 534 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-228ENST00000534373 TMEM60Q9H2L4 133 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 ENTPD7Q9NQZ7 604 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 DAXXQ9UER7 740 aaPredicted RBP14.91□□□□□ -0.02
CAPN1-228ENST00000534373 CNTNAP2Q9UHC6 1331 aa14.91□□□□□ -0.02
CAPN1-228ENST00000534373 PER2O15055 1255 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 ERLIN2O94905 339 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 SPATA31C1P0DKV0 1188 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 GUCY1B3Q02153 619 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 GIT2Q14161 759 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 SMC1AQ14683 1233 aaKnown RBP14.9□□□□□ -0.02
CAPN1-228ENST00000534373 CLUL1Q15846 466 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 CATSPER3Q86XQ3 398 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 NOSTRINQ8IVI9 506 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 ERMNQ8TAM6 284 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 URGCPQ8TCY9 931 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 LPPQ93052 612 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 LRFN3Q9BTN0 628 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 TBC1D13Q9NVG8 400 aa14.9□□□□□ -0.02
CAPN1-228ENST00000534373 DBR1Q9UK59 544 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms