RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 PCDHGA7Q9Y5G6 932 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 PCDHGA6Q9Y5G7 932 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 PCDHGA3Q9Y5H0 932 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 PCDHGA2Q9Y5H1 932 aa8.61□□□□□ -1.03
CASP4-213ENST00000534356 C2orf78A6NCI8 922 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 NRP2O60462 931 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 ALDH1L1O75891 902 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 MTHFD2P13995 350 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 SESN2P58004 480 aaPredicted RBP8.6□□□□□ -1.03
CASP4-213ENST00000534356 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
CASP4-213ENST00000534356 RNF151Q2KHN1 245 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 USP30Q70CQ3 517 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 KRTAP4-7Q9BYR0 210 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 PARD6AQ9NPB6 346 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 SPEF1Q9Y4P9 236 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 GPR45Q9Y5Y3 372 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 SLC4A7Q9Y6M7 1214 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 SMARCA2P51531 1590 aa8.6□□□□□ -1.03
CASP4-213ENST00000534356 LY86O95711 162 aa8.59□□□□□ -1.03
CASP4-213ENST00000534356 AGXTP21549 392 aa8.59□□□□□ -1.03
CASP4-213ENST00000534356 MGAT5Q09328 741 aa8.59□□□□□ -1.03
CASP4-213ENST00000534356 MAN2A1Q16706 1144 aa8.59□□□□□ -1.03
CASP4-213ENST00000534356 CLEC14AQ86T13 490 aa8.59□□□□□ -1.03
CASP4-213ENST00000534356 SLC2A13Q96QE2 648 aa8.59□□□□□ -1.03
CASP4-213ENST00000534356 IFT122Q9HBG6 1241 aa8.59□□□□□ -1.03
CASP4-213ENST00000534356 ZNF277Q9NRM2 450 aaPredicted RBP8.59□□□□□ -1.03
CASP4-213ENST00000534356 RBM8AQ9Y5S9 174 aaKnown RBP8.59□□□□□ -1.03
CASP4-213ENST00000534356 KIF21AQ7Z4S6 1674 aa8.59□□□□□ -1.03
CASP4-213ENST00000534356 SMARCA4P51532 1647 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 FSBPO95073 299 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 CNOT4O95628 575 aaKnown RBP8.58□□□□□ -1.04
CASP4-213ENST00000534356 GAAP10253 952 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 CNR2P34972 360 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 NEK2P51955 445 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 NRG3P56975 720 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 ACAP1Q15027 740 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 LMBR1LQ6UX01 489 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 GLB1L2Q8IW92 636 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 PIK3C3Q8NEB9 887 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 OR14K1Q8NGZ2 314 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 SLC13A1Q9BZW2 595 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 ADAM7Q9H2U9 754 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 NR2E1Q9Y466 385 aa8.58□□□□□ -1.04
CASP4-213ENST00000534356 KLHL33A6NCF5 533 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 ARHGAP6O43182 974 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 DAPK3O43293 454 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 XPOTO43592 962 aaKnown RBP8.57□□□□□ -1.04
CASP4-213ENST00000534356 PPP2CBP62714 309 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 PPP2CAP67775 309 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 ATP2C1P98194 919 aaPredicted RBP8.57□□□□□ -1.04
CASP4-213ENST00000534356 HGFACQ04756 655 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 NFYCQ13952 458 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 ODF1Q14990 250 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 ACAP2Q15057 778 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 TTF1Q15361 905 aaPredicted RBP8.57□□□□□ -1.04
CASP4-213ENST00000534356 ZNF568Q3ZCX4 644 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 SPOCD1Q6ZMY3 1216 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 ARHGEF18Q6ZSZ5 1173 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 FRMD5Q7Z6J6 570 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 PLEKHH3Q7Z736 793 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 PLA2G15Q8NCC3 412 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 JADE3Q92613 823 aa8.57□□□□□ -1.04
CASP4-213ENST00000534356 GCDHQ92947 438 aaPredicted RBP8.57□□□□□ -1.04
CASP4-213ENST00000534356 A0A1W2PR48 441 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 CCND1P24385 295 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 SLC5A3P53794 718 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 KRT85P78386 507 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 ODR4Q5SWX8 454 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 ZBTB46Q86UZ6 589 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 PNMA8AQ86V59 439 aaPredicted RBP8.56□□□□□ -1.04
CASP4-213ENST00000534356 CFHR4Q92496 578 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 LPPQ93052 612 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 CHMP4CQ96CF2 233 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 SLC7A6OSQ96CW6 309 aaPredicted RBP8.56□□□□□ -1.04
CASP4-213ENST00000534356 UIMC1Q96RL1 719 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 PTPN18Q99952 460 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 ACE2Q9BYF1 805 aaPredicted RBP8.56□□□□□ -1.04
CASP4-213ENST00000534356 THRAP3Q9Y2W1 955 aaKnown RBP8.56□□□□□ -1.04
CASP4-213ENST00000534356 MRFAP1Q9Y605 127 aa8.56□□□□□ -1.04
CASP4-213ENST00000534356 MATN2O00339 956 aa8.55□□□□□ -1.04
CASP4-213ENST00000534356 TMEM127O75204 238 aa8.55□□□□□ -1.04
CASP4-213ENST00000534356 INHBBP09529 407 aa8.55□□□□□ -1.04
CASP4-213ENST00000534356 ADCY7P51828 1080 aa8.55□□□□□ -1.04
CASP4-213ENST00000534356 MCL1Q07820 350 aa8.55□□□□□ -1.04
CASP4-213ENST00000534356 TCIRG1Q13488 830 aa8.55□□□□□ -1.04
CASP4-213ENST00000534356 ADRM1Q16186 407 aa8.55□□□□□ -1.04
CASP4-213ENST00000534356 UNC5BQ8IZJ1 945 aa8.55□□□□□ -1.04
CASP4-213ENST00000534356 HMGXB3Q12766 1538 aa8.54□□□□□ -1.04
CASP4-213ENST00000534356 BAZ1BQ9UIG0 1483 aaKnown RBP8.54□□□□□ -1.04
CASP4-213ENST00000534356 PRICKLE3O43900 615 aaPredicted RBP8.54□□□□□ -1.04
CASP4-213ENST00000534356 S100BP04271 92 aaPredicted RBP8.54□□□□□ -1.04
CASP4-213ENST00000534356 EPHB4P54760 987 aa8.54□□□□□ -1.04
CASP4-213ENST00000534356 MBNL2Q5VZF2 373 aaKnown RBP8.54□□□□□ -1.04
CASP4-213ENST00000534356 RAVER1Q8IY67 606 aaKnown RBP8.54□□□□□ -1.04
CASP4-213ENST00000534356 PPM1NQ8N819 430 aa8.54□□□□□ -1.04
CASP4-213ENST00000534356 GLB1L3Q8NCI6 653 aaPredicted RBP8.54□□□□□ -1.04
CASP4-213ENST00000534356 FATE1Q969F0 183 aa8.54□□□□□ -1.04
CASP4-213ENST00000534356 HOOK2Q96ED9 719 aa8.54□□□□□ -1.04
CASP4-213ENST00000534356 TEKT5Q96M29 485 aa8.54□□□□□ -1.04
CASP4-213ENST00000534356 AASDHPPTQ9NRN7 309 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms