RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 LPPQ93052 612 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 CDCA3Q99618 268 aaPredicted RBP9.96□□□□□ -0.82
COPB1-211ENST00000534234 TCF25Q9BQ70 676 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 MRPL9Q9BYD2 267 aaKnown RBP9.96□□□□□ -0.82
COPB1-211ENST00000534234 NGRNQ9NPE2 291 aaKnown RBP9.96□□□□□ -0.82
COPB1-211ENST00000534234 ENTPD7Q9NQZ7 604 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.82
COPB1-211ENST00000534234 FAM105AQ9NUU6 356 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 NCOR1O75376 2440 aa9.96□□□□□ -0.82
COPB1-211ENST00000534234 FSD2A1L4K1 749 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 HIDE1A8MVS5 230 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 NT5C1B-RDH14C9J2C7 533 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 ASAP2O43150 1006 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 DCXO43602 365 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 TXKP42681 527 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 RAB27AP51159 221 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 CALCRLQ16602 461 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 DUSP6Q16828 381 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 PLPP4Q5VZY2 271 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 SRGAP1Q7Z6B7 1085 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 SLC39A11Q8N1S5 342 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 SMRP1Q8NCR6 262 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 TCP11Q8WWU5 503 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 POP1Q99575 1024 aaKnown RBP9.95□□□□□ -0.82
COPB1-211ENST00000534234 HSD17B14Q9BPX1 270 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 EIF2AK1Q9BQI3 630 aaKnown RBP9.95□□□□□ -0.82
COPB1-211ENST00000534234 TTC12Q9H892 705 aaPredicted RBP9.95□□□□□ -0.82
COPB1-211ENST00000534234 MINDY3Q9H8M7 445 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 LIMCH1Q9UPQ0 1083 aa9.95□□□□□ -0.82
COPB1-211ENST00000534234 MEIS3P2A8K0S8 358 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 GAS2O43903 313 aaKnown RBP9.94□□□□□ -0.82
COPB1-211ENST00000534234 NEMFO60524 1076 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 ATP2B1P20020 1258 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 BCAR1P56945 870 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 EMC2Q15006 297 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 SAFBQ15424 915 aaKnown RBP eCLIP9.94□□□□□ -0.82
COPB1-211ENST00000534234 GLB1LQ6UWU2 654 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 FERMT3Q86UX7 667 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 MRPL43Q8N983 215 aaKnown RBP9.94□□□□□ -0.82
COPB1-211ENST00000534234 RNF149Q8NC42 400 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 VN1R2Q8NFZ6 395 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 RSPH1Q8WYR4 309 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 PGBD4Q96DM1 585 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 AGPAT5Q9NUQ2 364 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 INPP5FQ9Y2H2 1132 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 USP15Q9Y4E8 981 aaPredicted RBP9.94□□□□□ -0.82
COPB1-211ENST00000534234 PCDHB2Q9Y5E7 798 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 RALGAPA2Q2PPJ7 1873 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 BRWD1Q9NSI6 2320 aa9.94□□□□□ -0.82
COPB1-211ENST00000534234 PRR33A8MZF0 331 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 WNT7AO00755 349 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 ZC3H11AO75152 810 aaKnown RBP eCLIP9.93□□□□□ -0.82
COPB1-211ENST00000534234 OFD1O75665 1012 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 LYPLA2O95372 231 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 SRGAP2BP0DMP2 458 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 HOXA11P31270 313 aaPredicted RBP9.93□□□□□ -0.82
COPB1-211ENST00000534234 GUCY1B3Q02153 619 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 RNASELQ05823 741 aaKnown RBP9.93□□□□□ -0.82
COPB1-211ENST00000534234 ST3GAL1Q11201 340 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 KCNC3Q14003 757 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 MXD4Q14582 209 aaPredicted RBP9.93□□□□□ -0.82
COPB1-211ENST00000534234 BMS1Q14692 1282 aaKnown RBP9.93□□□□□ -0.82
COPB1-211ENST00000534234 NOMO2Q5JPE7 1267 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 TMEM184AQ6ZMB5 413 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 MRPL10Q7Z7H8 261 aaKnown RBP9.93□□□□□ -0.82
COPB1-211ENST00000534234 RNF135Q8IUD6 432 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 TMEM169Q96HH4 297 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 MTMR9Q96QG7 549 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 MTRQ99707 1265 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 XPNPEP1Q9NQW7 623 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 ANKEF1Q9NU02 776 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 TBC1D13Q9NVG8 400 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 MYO7AQ13402 2215 aa9.93□□□□□ -0.82
COPB1-211ENST00000534234 A0A087WWV3 80 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 CARNS1A5YM72 827 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 C2orf71A6NGG8 1288 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 DGAT1O75907 488 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 CXCL14O95715 111 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 CENPBP07199 599 aaPredicted RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 GALTP07902 379 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 XRCC6P12956 609 aaKnown RBP eCLIP9.92□□□□□ -0.82
COPB1-211ENST00000534234 MCM7P33993 719 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 TECP42680 631 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 PTENP60484 403 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 NCBP1Q09161 790 aaKnown RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 SMC1AQ14683 1233 aaKnown RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 ANKRD54Q6NXT1 300 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 LLGL2Q6P1M3 1020 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 AGMOQ6ZNB7 445 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 CCDC83Q8IWF9 413 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 PIGOQ8TEQ8 1089 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 C8orf76Q96K31 380 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 CCDC43Q96MW1 224 aaKnown RBP9.92□□□□□ -0.82
COPB1-211ENST00000534234 GBP3Q9H0R5 595 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 TMEM60Q9H2L4 133 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 NRDE2Q9H7Z3 1164 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 HCN4Q9Y3Q4 1203 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 NLRC5Q86WI3 1866 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 ERLIN2O94905 339 aa9.92□□□□□ -0.82
COPB1-211ENST00000534234 ALDH2P05091 517 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms