RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 ZNF579Q8NAF0 562 aaKnown RBP17.16■□□□□ 0.34
UBXN1-217ENST00000534176 AK8Q96MA6 479 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 NT5C3AQ9H0P0 336 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 C2orf40Q9H1Z8 148 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 XPNPEP1Q9NQW7 623 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 FAM105AQ9NUU6 356 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 KANSL3Q9P2N6 904 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 PLAGL2Q9UPG8 496 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 DNM3Q9UQ16 869 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 PCDHB6Q9Y5E3 794 aa17.16■□□□□ 0.34
UBXN1-217ENST00000534176 UNC80Q8N2C7 3258 aa17.15■□□□□ 0.34
UBXN1-217ENST00000534176 EYSQ5T1H1 3165 aa17.15■□□□□ 0.34
UBXN1-217ENST00000534176 MED24O75448 989 aa17.15■□□□□ 0.34
UBXN1-217ENST00000534176 KRT17Q04695 432 aa17.15■□□□□ 0.34
UBXN1-217ENST00000534176 FAM102BQ5T8I3 360 aa17.15■□□□□ 0.34
UBXN1-217ENST00000534176 KSR1Q8IVT5 923 aa17.15■□□□□ 0.34
UBXN1-217ENST00000534176 ZBTB8OSQ8IWT0 167 aa17.15■□□□□ 0.34
UBXN1-217ENST00000534176 SNX29Q8TEQ0 813 aa17.15■□□□□ 0.34
UBXN1-217ENST00000534176 KIFAP3Q92845 792 aa17.15■□□□□ 0.34
UBXN1-217ENST00000534176 ZNF668Q96K58 619 aaPredicted RBP17.15■□□□□ 0.34
UBXN1-217ENST00000534176 TIPINQ9BVW5 301 aa17.15■□□□□ 0.34
UBXN1-217ENST00000534176 ZBTB39O15060 712 aa17.14■□□□□ 0.33
UBXN1-217ENST00000534176 USO1O60763 962 aaKnown RBP17.14■□□□□ 0.33
UBXN1-217ENST00000534176 CYP11B2P19099 503 aa17.14■□□□□ 0.33
UBXN1-217ENST00000534176 PLCB3Q01970 1234 aa17.14■□□□□ 0.33
UBXN1-217ENST00000534176 PADI6Q6TGC4 694 aa17.14■□□□□ 0.33
UBXN1-217ENST00000534176 URGCPQ8TCY9 931 aa17.14■□□□□ 0.33
UBXN1-217ENST00000534176 IFT74Q96LB3 600 aa17.14■□□□□ 0.33
UBXN1-217ENST00000534176 ZNF558Q96NG5 402 aa17.14■□□□□ 0.33
UBXN1-217ENST00000534176 CASD1Q96PB1 797 aa17.14■□□□□ 0.33
UBXN1-217ENST00000534176 POLR3FQ9H1D9 316 aaPredicted RBP17.14■□□□□ 0.33
UBXN1-217ENST00000534176 TYW1Q9NV66 732 aaKnown RBP17.14■□□□□ 0.33
UBXN1-217ENST00000534176 PRMT7Q9NVM4 692 aaPredicted RBP17.14■□□□□ 0.33
UBXN1-217ENST00000534176 KCND2Q9NZV8 630 aa17.14■□□□□ 0.33
UBXN1-217ENST00000534176 FNDC1Q4ZHG4 1894 aaPredicted RBP17.14■□□□□ 0.33
UBXN1-217ENST00000534176 ZMYM2Q9UBW7 1377 aa17.14■□□□□ 0.33
UBXN1-217ENST00000534176 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.13■□□□□ 0.33
UBXN1-217ENST00000534176 INO80B-WBP1J3KQ70 363 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 K7ELQ4 463 aaPredicted RBP17.13■□□□□ 0.33
UBXN1-217ENST00000534176 FGFR1P11362 822 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 IBSPP21815 317 aaPredicted RBP17.13■□□□□ 0.33
UBXN1-217ENST00000534176 FGFR4P22455 802 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 NAMPTP43490 491 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 ALDH7A1P49419 539 aaKnown RBP17.13■□□□□ 0.33
UBXN1-217ENST00000534176 COL19A1Q14993 1142 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 POTEGQ6S5H5 508 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 APBB1IPQ7Z5R6 666 aaPredicted RBP17.13■□□□□ 0.33
UBXN1-217ENST00000534176 MRPL10Q7Z7H8 261 aaKnown RBP17.13■□□□□ 0.33
UBXN1-217ENST00000534176 THNSL1Q8IYQ7 743 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 KLHL23Q8NBE8 558 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 COLGALT1Q8NBJ5 622 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 RNF169Q8NCN4 708 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 PABPC5Q96DU9 382 aaKnown RBP17.13■□□□□ 0.33
UBXN1-217ENST00000534176 CDCA3Q99618 268 aaPredicted RBP17.13■□□□□ 0.33
UBXN1-217ENST00000534176 UBE2ZQ9H832 354 aaPredicted RBP17.13■□□□□ 0.33
UBXN1-217ENST00000534176 C17orf75Q9HAS0 396 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 PCDHB2Q9Y5E7 798 aa17.13■□□□□ 0.33
UBXN1-217ENST00000534176 GRM6O15303 877 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 CSDE1O75534 798 aaKnown RBP17.12■□□□□ 0.33
UBXN1-217ENST00000534176 FGF18O76093 207 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 EYA4O95677 639 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 ITGB1P05556 798 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 GLRA2P23416 452 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 EFNA5P52803 228 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 CAPSQ13938 189 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 FAM187BQ17R55 369 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 CDCA2Q69YH5 1023 aaPredicted RBP17.12■□□□□ 0.33
UBXN1-217ENST00000534176 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 SPPL3Q8TCT6 385 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 POF1BQ8WVV4 589 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 SNX21Q969T3 373 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 TRIM6Q9C030 488 aaPredicted RBP17.12■□□□□ 0.33
UBXN1-217ENST00000534176 CWH43Q9H720 699 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 NGRNQ9NPE2 291 aaKnown RBP17.12■□□□□ 0.33
UBXN1-217ENST00000534176 TLR9Q9NR96 1032 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 BMP2KQ9NSY1 1161 aaPredicted RBP17.12■□□□□ 0.33
UBXN1-217ENST00000534176 KIAA1024Q9UPX6 916 aa17.12■□□□□ 0.33
UBXN1-217ENST00000534176 LRRIQ4A6NIV6 560 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 SRGAP2BP0DMP2 458 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 NCLP19338 710 aaKnown RBP17.11■□□□□ 0.33
UBXN1-217ENST00000534176 SCP2P22307 547 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 HOXA11P31270 313 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-217ENST00000534176 MBTD1Q05BQ5 628 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 NBR1Q14596 966 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 MAPK6Q16659 721 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 LEXMQ3ZCV2 418 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 NOMO2Q5JPE7 1267 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 HYIQ5T013 277 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 KCNT2Q6UVM3 1135 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 CDK5RAP3Q96JB5 506 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 DRC1Q96MC2 740 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 COL25A1Q9BXS0 654 aaPredicted RBP17.11■□□□□ 0.33
UBXN1-217ENST00000534176 CSRNP2Q9H175 543 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 BHMT2Q9H2M3 363 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 ALG13Q9NP73 1137 aaKnown RBP17.11■□□□□ 0.33
UBXN1-217ENST00000534176 DDX19AQ9NUU7 478 aaKnown RBP17.11■□□□□ 0.33
UBXN1-217ENST00000534176 SPG21Q9NZD8 308 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 PRUNE2Q8WUY3 3088 aa17.11■□□□□ 0.33
UBXN1-217ENST00000534176 TSPAN1O60635 241 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms