RNA–Protein interactions for RNA: ENST00000534171.5

ALKBH3-212, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 5

Gene ALKBH3, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-212ENST00000534171 ZNF579Q8NAF0 562 aaKnown RBP16.72■□□□□ 0.27
ALKBH3-212ENST00000534171 CEP170P1Q96L14 293 aa16.72■□□□□ 0.27
ALKBH3-212ENST00000534171 KCNH6Q9H252 994 aa16.72■□□□□ 0.27
ALKBH3-212ENST00000534171 FAM105AQ9NUU6 356 aa16.72■□□□□ 0.27
ALKBH3-212ENST00000534171 WRAP73Q9P2S5 460 aaPredicted RBP16.72■□□□□ 0.27
ALKBH3-212ENST00000534171 COL4A3BPQ9Y5P4 624 aa16.72■□□□□ 0.27
ALKBH3-212ENST00000534171 CACNA1HO95180 2353 aa16.72■□□□□ 0.27
ALKBH3-212ENST00000534171 C2orf71A6NGG8 1288 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 GAS2O43903 313 aaKnown RBP16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 MARCH6O60337 910 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 POLGP54098 1239 aaPredicted RBP16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 SPIRE1Q08AE8 756 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 BMS1Q14692 1282 aaKnown RBP16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 NOMO2Q5JPE7 1267 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 SYCE2Q6PIF2 218 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 OTUD6AQ7L8S5 288 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 SRGAP1Q7Z6B7 1085 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 SLFN12Q8IYM2 578 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 PRPF31Q8WWY3 499 aaKnown RBP16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 PSPC1Q8WXF1 523 aaKnown RBP16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 TMEM169Q96HH4 297 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 MFSD14AQ96MC6 490 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 LXNQ9BS40 222 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 AGPAT5Q9NUQ2 364 aa16.71■□□□□ 0.27
ALKBH3-212ENST00000534171 ASAP2O43150 1006 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 FDPSP14324 419 aaKnown RBP16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 YWHABP31946 246 aaKnown RBP16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 AK2P54819 239 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 EARS2Q5JPH6 523 aaKnown RBP16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 LLGL2Q6P1M3 1020 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 BMP8AQ7Z5Y6 402 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 POTEDQ86YR6 584 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 TCP11Q8WWU5 503 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 CASP10Q92851 521 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 TNFRSF25Q93038 417 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 LPPQ93052 612 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 TMEM143Q96AN5 459 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 PGBD4Q96DM1 585 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 RPGRIP1Q96KN7 1286 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 ZSWIM4Q9H7M6 989 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 TBC1D13Q9NVG8 400 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 RGL1Q9NZL6 768 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 PCDHB2Q9Y5E7 798 aa16.7■□□□□ 0.26
ALKBH3-212ENST00000534171 NT5C1B-RDH14C9J2C7 533 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 DTNBO60941 627 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 ZC3H11AO75152 810 aaKnown RBP eCLIP16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 OFD1O75665 1012 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 CXCL14O95715 111 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 KRT2P35908 639 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 LAMTOR4Q0VGL1 99 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 NCAPH2Q6IBW4 605 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 TRIM67Q6ZTA4 783 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 MRPL10Q7Z7H8 261 aaKnown RBP16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 DDX53Q86TM3 631 aaKnown RBP16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 VPS52Q8N1B4 723 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 IGSF21Q96ID5 467 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 ZBP1Q9H171 429 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 NRDE2Q9H7Z3 1164 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 BRMS1Q9HCU9 246 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 HCFC2Q9Y5Z7 792 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 IRAK3Q9Y616 596 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 MYO10Q9HD67 2058 aa16.69■□□□□ 0.26
ALKBH3-212ENST00000534171 MEIS3P2A8K0S8 358 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 CLASP2O75122 1294 aaKnown RBP16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 GALTP07902 379 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 SRGAP2CP0DJJ0 459 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 HOXA11P31270 313 aaPredicted RBP16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 ZXDAP98168 799 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 RNASELQ05823 741 aaKnown RBP16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 NR5A1Q13285 461 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 EMC2Q15006 297 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 ME3Q16798 604 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 LONRF3Q496Y0 759 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 TMEM173Q86WV6 379 aaPredicted RBP16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 NECAB1Q8N987 351 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 DYDC2Q96IM9 177 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 MINDY3Q9H8M7 445 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 INPP5FQ9Y2H2 1132 aa16.68■□□□□ 0.26
ALKBH3-212ENST00000534171 FAM205CA6NFA0 338 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 TMEM221A6NGB7 291 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 M0R296 226 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 SLITRK3O94933 977 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 CTSAP10619 480 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 CYP4A11Q02928 519 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 ITIH3Q06033 890 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 GIT2Q14161 759 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 CTTNQ14247 550 aaKnown RBP16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 PCBP1Q15365 356 aaKnown RBP eCLIP16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 XKR9Q5GH70 373 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 AGMOQ6ZNB7 445 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 FERMT3Q86UX7 667 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 TPH2Q8IWU9 490 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 URGCPQ8TCY9 931 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 NECTIN4Q96NY8 510 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 HSD17B14Q9BPX1 270 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 ADAM7Q9H2U9 754 aa16.67■□□□□ 0.26
ALKBH3-212ENST00000534171 PPP4R2Q9NY27 417 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms