RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 ATP2B4P23634 1241 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 STIP1P31948 543 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 RPL5P46777 297 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 ZNF844Q08AG5 666 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 KCNH2Q12809 1159 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 KBTBD12Q3ZCT8 623 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 DCAF17Q5H9S7 520 aaPredicted RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 KLHDC7AQ5VTJ3 777 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 FBXW10Q5XX13 1052 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 C6orf89Q6UWU4 347 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 TMPRSS6Q8IU80 811 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 SCFD1Q8WVM8 642 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 SLCO2A1Q92959 643 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 ZNF518BQ9C0D4 1074 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 XAB2Q9HCS7 855 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 SLC39A2Q9NP94 309 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 TBC1D23Q9NUY8 699 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 MCM8Q9UJA3 840 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 BLOC1S6Q9UL45 172 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 CAPN6Q9Y6Q1 641 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 PNMA6FA0A0J9YX94 578 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 RASA4BC9J798 803 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 TM9SF1O15321 606 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 RASA4O43374 803 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 FGRP09769 529 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 EEF2P13639 858 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 CHN1P15882 459 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 NEDD4P46934 1319 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 IFNAR2P48551 515 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 PRKAA2P54646 552 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 ELF3P78545 371 aaPredicted RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 EPS8Q12929 822 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 DCTN2Q13561 401 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 TCEAL1Q15170 157 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 EPHA7Q15375 998 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 SF3B3Q15393 1217 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 TRADDQ15628 312 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 DCUN1D2Q6PH85 259 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 ADAMTS13Q76LX8 1427 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 TMC3Q7Z5M5 1100 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 NLRX1Q86UT6 975 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 NLRP10Q86W26 655 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 C12orf50Q8NA57 414 aaPredicted RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 TMC2Q8TDI7 906 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 BTBD9Q96Q07 612 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 TGS1Q96RS0 853 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 VPS11Q9H270 941 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 FAM124BQ9H5Z6 455 aaPredicted RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 PSTPIP2Q9H939 334 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 ABCF3Q9NUQ8 709 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 EFR3BQ9Y2G0 817 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.32□□□□□ -1.72
SOX6-217ENST00000533870 AP4S1Q9Y587 144 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 GLI2P10070 1586 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 RAD51CO43502 376 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 TGDSO95455 350 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 TBXAS1P24557 533 aaPredicted RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 CNTFP26441 200 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 GYS2P54840 703 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 CASP7P55210 303 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 MYL7Q01449 175 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 SLC34A1Q06495 639 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 BNIP1Q12981 228 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 KYNUQ16719 465 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 BMT2Q1RMZ1 405 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 KAZNQ674X7 775 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 PALM2Q8IXS6 379 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.32□□□□□ -1.72
SOX6-217ENST00000533870 DCAF4Q8WV16 495 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 CCT6BQ92526 530 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 KRT35Q92764 455 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 CCDC127Q96BQ5 260 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 POLR3CQ9BUI4 534 aaPredicted RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 DDX23Q9BUQ8 820 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 EBF2Q9HAK2 575 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 PARVGQ9HBI0 331 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.32□□□□□ -1.72
SOX6-217ENST00000533870 ARHGAP20Q9P2F6 1191 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 DNAJC12Q9UKB3 198 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 ZCCHC11Q5TAX3 1644 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 C16orf96A6NNT2 1141 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 SLCO1B7G3V0H7 640 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 C2CD2LO14523 706 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 TRAFD1O14545 582 aaPredicted RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 PLA2G4BP0C869 781 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 SEC24CP53992 1094 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 NAA20P61599 178 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 STK4Q13043 487 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 KRR1Q13601 381 aaKnown RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 CCDC80Q76M96 950 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 ILDR1Q86SU0 546 aaPredicted RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 RASGEF1CQ8N431 466 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 UIMC1Q96RL1 719 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 TBCBQ99426 244 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 ANO3Q9BYT9 981 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 GCOM2Q9BZD3 368 aaPredicted RBP4.32□□□□□ -1.72
SOX6-217ENST00000533870 OSBPL8Q9BZF1 889 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 YIPF3Q9GZM5 350 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 ST7Q9NRC1 585 aa4.32□□□□□ -1.72
SOX6-217ENST00000533870 PCYOX1Q9UHG3 505 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms