RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 PRKD2Q9BZL6 878 aa12.12□□□□□ -0.47
CSDE1-215ENST00000533818 ADAMTS10Q9H324 1103 aa12.12□□□□□ -0.47
CSDE1-215ENST00000533818 SMOC1Q9H4F8 434 aa12.12□□□□□ -0.47
CSDE1-215ENST00000533818 NRDE2Q9H7Z3 1164 aa12.12□□□□□ -0.47
CSDE1-215ENST00000533818 LMAN1LQ9HAT1 526 aa12.12□□□□□ -0.47
CSDE1-215ENST00000533818 HEBP1Q9NRV9 189 aa12.12□□□□□ -0.47
CSDE1-215ENST00000533818 MSRB2Q9Y3D2 182 aa12.12□□□□□ -0.47
CSDE1-215ENST00000533818 FREM2Q5SZK8 3169 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 A0A0U1RQF3 1178 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 SHISA7A6NL88 538 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 C4orf47A7E2U8 309 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 TEX28O15482 410 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 HYAL3O43820 417 aaPredicted RBP12.11□□□□□ -0.47
CSDE1-215ENST00000533818 PAPLNO95428 1278 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 CEACAM1P13688 526 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 KCNA2P16389 499 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 TROAPQ12815 778 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 DAB2IPQ5VWQ8 1189 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 LARP1BQ659C4 914 aaKnown RBP12.11□□□□□ -0.47
CSDE1-215ENST00000533818 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
CSDE1-215ENST00000533818 ZNF687Q8N1G0 1237 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 HDAC7Q8WUI4 952 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 PHF20Q9BVI0 1012 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 PLEKHA4Q9H4M7 779 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 FRMPD4Q14CM0 1322 aa12.11□□□□□ -0.47
CSDE1-215ENST00000533818 DOCK5Q9H7D0 1870 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 LAMA5O15230 3695 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 MAN2B1O00754 1011 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 ZBTB5O15062 677 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 ANP32CO43423 234 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 HMMRO75330 724 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 PARP1P09874 1014 aaKnown RBP12.1□□□□□ -0.47
CSDE1-215ENST00000533818 SLC11A1P49279 550 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 RNASELQ05823 741 aaKnown RBP12.1□□□□□ -0.47
CSDE1-215ENST00000533818 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 PCNX4Q63HM2 1172 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 DGKHQ86XP1 1220 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 FGF13Q92913 245 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 RPS6KC1Q96S38 1066 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 ZKSCAN3Q9BRR0 538 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 GBP3Q9H0R5 595 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 ZDHHC7Q9NXF8 308 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 PKD2L1Q9P0L9 805 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 DNAJB4Q9UDY4 337 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 KLK13Q9UKR3 277 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 SDK1Q7Z5N4 2213 aa12.1□□□□□ -0.47
CSDE1-215ENST00000533818 LAMA1P25391 3075 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
CSDE1-215ENST00000533818 EPN2O95208 641 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 URODP06132 367 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 RLBP1P12271 317 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 ZMYM1Q5SVZ6 1142 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 PLPPR4Q7Z2D5 763 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 GRASPQ7Z6J2 395 aaPredicted RBP12.09□□□□□ -0.47
CSDE1-215ENST00000533818 PALB2Q86YC2 1186 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 CDHR1Q96JP9 859 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 EDEM2Q9BV94 578 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 KAT14Q9H8E8 782 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 TBC1D13Q9NVG8 400 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 SSX2IPQ9Y2D8 614 aa12.09□□□□□ -0.47
CSDE1-215ENST00000533818 MYH15Q9Y2K3 1946 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 GPR32O75388 356 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 VTNP04004 478 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 CAPNS1P04632 268 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 CSRP1P21291 193 aaKnown RBP12.08□□□□□ -0.48
CSDE1-215ENST00000533818 STAT5BP51692 787 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 TRAF1Q13077 416 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 NOMO2Q5JPE7 1267 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 VPS53Q5VIR6 699 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 TCEAL6Q6IPX3 200 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 SPEM1Q8N4L4 309 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 HNRNPLLQ8WVV9 542 aaKnown RBP12.08□□□□□ -0.48
CSDE1-215ENST00000533818 RSPH1Q8WYR4 309 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 TCEAL3Q969E4 200 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 GPRASP2Q96D09 838 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 MTMR8Q96EF0 704 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 LRIG1Q96JA1 1093 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 HNRNPABQ99729 332 aaKnown RBP12.08□□□□□ -0.48
CSDE1-215ENST00000533818 MKNK1Q9BUB5 465 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 VPS45Q9NRW7 570 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 INPP5FQ9Y2H2 1132 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 MYO18BQ8IUG5 2567 aa12.08□□□□□ -0.48
CSDE1-215ENST00000533818 KALRNO60229 2985 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 K7ESF4 209 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 PRB1P04280 392 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 MPLP40238 635 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 RAP1GAPP47736 663 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 NTHL1P78549 312 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 GAS6Q14393 721 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 ALX1Q15699 326 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 LONRF3Q496Y0 759 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 TSHZ3Q63HK5 1081 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 GLB1LQ6UWU2 654 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 MFSD6Q6ZSS7 791 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 CACNA2D4Q7Z3S7 1137 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 STAG2Q8N3U4 1231 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 PCDHGA5Q9Y5G8 931 aa12.07□□□□□ -0.48
CSDE1-215ENST00000533818 GREB1Q4ZG55 1949 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms