RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 NCK2O43639 380 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 GAS2O43903 313 aaKnown RBP11.62□□□□□ -0.55
CAPN1-225ENST00000533704 USO1O60763 962 aaKnown RBP11.62□□□□□ -0.55
CAPN1-225ENST00000533704 MED24O75448 989 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 DGAT1O75907 488 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 ERLIN2O94905 339 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 LYPLA2O95372 231 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 SSTR3P32745 418 aaPredicted RBP11.62□□□□□ -0.55
CAPN1-225ENST00000533704 CA8P35219 290 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 UBE3AQ05086 875 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 DLX2Q07687 328 aaPredicted RBP11.62□□□□□ -0.55
CAPN1-225ENST00000533704 TFDP1Q14186 410 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 MCTP1Q6DN14 999 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 GLB1LQ6UWU2 654 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 SRGAP1Q7Z6B7 1085 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 ERMNQ8TAM6 284 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 ASAP3Q8TDY4 903 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 MRPL9Q9BYD2 267 aaKnown RBP11.62□□□□□ -0.55
CAPN1-225ENST00000533704 GBP3Q9H0R5 595 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 POLR3FQ9H1D9 316 aaPredicted RBP11.62□□□□□ -0.55
CAPN1-225ENST00000533704 TLE6Q9H808 572 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 AGPAT5Q9NUQ2 364 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 PUF60Q9UHX1 559 aaKnown RBP11.62□□□□□ -0.55
CAPN1-225ENST00000533704 FAM50BQ9Y247 325 aa11.62□□□□□ -0.55
CAPN1-225ENST00000533704 SPTBN5Q9NRC6 3674 aaKnown RBP11.62□□□□□ -0.55
CAPN1-225ENST00000533704 MYH11P35749 1972 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 GRXCR2A6NFK2 248 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 MEIS3P2A8K0S8 358 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 NT5C1B-RDH14C9J2C7 533 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 INO80B-WBP1J3KQ70 363 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 PER2O15055 1255 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 ZC3H11AO75152 810 aaKnown RBP eCLIP11.61□□□□□ -0.55
CAPN1-225ENST00000533704 TBX10O75333 385 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 SPATA31C1P0DKV0 1188 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 SKIP12755 728 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 PPM1AP35813 382 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 LTBRP36941 435 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 RARRES1P49788 294 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 RAB27AP51159 221 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 ERVFC1P60507 584 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 KRT17Q04695 432 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 RNASELQ05823 741 aaKnown RBP11.61□□□□□ -0.55
CAPN1-225ENST00000533704 MXD4Q14582 209 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-225ENST00000533704 PUS10Q3MIT2 529 aaKnown RBP11.61□□□□□ -0.55
CAPN1-225ENST00000533704 POTEGQ6S5H5 508 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 CATSPER3Q86XQ3 398 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 MRPS27Q92552 414 aaKnown RBP11.61□□□□□ -0.55
CAPN1-225ENST00000533704 PGBD4Q96DM1 585 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 CPB2Q96IY4 423 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 TMX3Q96JJ7 454 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 TCF25Q9BQ70 676 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 TUFT1Q9NNX1 390 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 SPG21Q9NZD8 308 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 KIF3AQ9Y496 699 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 PCDHB2Q9Y5E7 798 aa11.61□□□□□ -0.55
CAPN1-225ENST00000533704 ARHGEF35A5YM69 484 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 CD2BP2O95400 341 aaKnown RBP11.6□□□□□ -0.55
CAPN1-225ENST00000533704 CCT6AP40227 531 aaKnown RBP11.6□□□□□ -0.55
CAPN1-225ENST00000533704 TRAPPC10P48553 1259 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 ALDH7A1P49419 539 aaKnown RBP11.6□□□□□ -0.55
CAPN1-225ENST00000533704 BCAR1P56945 870 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 PTENP60484 403 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 NCBP1Q09161 790 aaKnown RBP11.6□□□□□ -0.55
CAPN1-225ENST00000533704 ORC2Q13416 577 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-225ENST00000533704 ADAM15Q13444 863 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 CAPSQ13938 189 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 COL19A1Q14993 1142 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 NOMO2Q5JPE7 1267 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 TMC7Q7Z402 723 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 FAM178BQ8IXR5 827 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 EFHBQ8N7U6 833 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 URGCPQ8TCY9 931 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 NACC1Q96RE7 527 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 APOL6Q9BWW8 343 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 CD320Q9NPF0 282 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 GPRC5CQ9NQ84 441 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 CD207Q9UJ71 328 aa11.6□□□□□ -0.55
CAPN1-225ENST00000533704 BARX2Q9UMQ3 279 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-225ENST00000533704 XIRP2A4UGR9 3374 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 LRRIQ4A6NIV6 560 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 H3BQV1 296 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 TSPAN1O60635 241 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 ZNF623O75123 536 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 XRCC6P12956 609 aaKnown RBP eCLIP11.59□□□□□ -0.55
CAPN1-225ENST00000533704 LIG1P18858 919 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 GLRA2P23416 452 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 GJB2P29033 226 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 ARL2P36404 184 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 RBM10P98175 930 aaKnown RBP11.59□□□□□ -0.55
CAPN1-225ENST00000533704 PLCB3Q01970 1234 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 TMEM132AQ24JP5 1023 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 HAUS3Q68CZ6 603 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 LLGL2Q6P1M3 1020 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 GJD3Q8N144 294 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 SLC39A11Q8N1S5 342 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 TMEM169Q96HH4 297 aa11.59□□□□□ -0.55
CAPN1-225ENST00000533704 FAM193BQ96PV7 902 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-225ENST00000533704 POLR3CQ9BUI4 534 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms