RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ZRSR1Q15695 479 aaKnown RBP22.65■■□□□ 1.22
CCS-208ENST00000533244 C1orf186Q6ZWK4 172 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 DAW1Q8N136 415 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 SYT2Q8N9I0 419 aaPredicted RBP22.65■■□□□ 1.22
CCS-208ENST00000533244 LINC00301Q8NCQ3 95 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 KIFAP3Q92845 792 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 CDK5RAP3Q96JB5 506 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 RUSC1Q9BVN2 902 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 TSPAN1O60635 241 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 EOMESO95936 686 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 NAMPTP43490 491 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 SLC12A3P55017 1021 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 TWF2Q6IBS0 349 aaKnown RBP22.65■■□□□ 1.22
CCS-208ENST00000533244 CALML4Q96GE6 196 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 ZNF396Q96N95 335 aaPredicted RBP22.65■■□□□ 1.22
CCS-208ENST00000533244 PLIN2Q99541 437 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 MTUS1Q9ULD2 1270 aa22.65■■□□□ 1.22
CCS-208ENST00000533244 KIAA1671Q9BY89 1806 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 LRRIQ4A6NIV6 560 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 INO80B-WBP1J3KQ70 363 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 ZNF623O75123 536 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 FGFR1P11362 822 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 GUCY2CP25092 1073 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 AXLP30530 894 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 MAPK7Q13164 816 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 KARSQ15046 597 aaKnown RBP22.64■■□□□ 1.21
CCS-208ENST00000533244 EPC2Q52LR7 807 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 UBXN11Q5T124 520 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 FOXD4L5Q5VV16 416 aaPredicted RBP22.64■■□□□ 1.21
CCS-208ENST00000533244 PPP4R3CPQ6ZMV5 832 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 USP49Q70CQ1 688 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 TMEM192Q8IY95 271 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 FOXD4L4Q8WXT5 416 aaPredicted RBP22.64■■□□□ 1.21
CCS-208ENST00000533244 CLIC6Q96NY7 704 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 TIPINQ9BVW5 301 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 BLOC1S4Q9NUP1 217 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 FAM105AQ9NUU6 356 aa22.64■■□□□ 1.21
CCS-208ENST00000533244 MRPL42Q9Y6G3 142 aaKnown RBP22.64■■□□□ 1.21
CCS-208ENST00000533244 EYSQ5T1H1 3165 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 C5orf67F2Z3F1 127 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 HOXA2O43364 376 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 ERLIN2O94905 339 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 YEATS4O95619 227 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 PLA2G4BP0C869 781 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 SKIP12755 728 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 IBSPP21815 317 aaPredicted RBP22.63■■□□□ 1.21
CCS-208ENST00000533244 RAB27AP51159 221 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 PPP2R5AQ15172 486 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 KRI1Q8N9T8 703 aaKnown RBP22.63■■□□□ 1.21
CCS-208ENST00000533244 FBXO22Q8NEZ5 403 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 EPSTI1Q96J88 318 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 TMEM117Q9H0C3 514 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 C2orf40Q9H1Z8 148 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 FZD8Q9H461 694 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 KCND2Q9NZV8 630 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 RWDD3Q9Y3V2 267 aa22.63■■□□□ 1.21
CCS-208ENST00000533244 HIP1RO75146 1068 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 BRD1O95696 1058 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 PLCG1P19174 1290 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 FAM187BQ17R55 369 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 PAN2Q504Q3 1202 aaKnown RBP22.62■■□□□ 1.21
CCS-208ENST00000533244 CLLU1OSQ5K130 101 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 MAFAQ8NHW3 353 aaPredicted RBP22.62■■□□□ 1.21
CCS-208ENST00000533244 GDPD5Q8WTR4 605 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 CCDC51Q96ER9 411 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 PRIMPOLQ96LW4 560 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 CASD1Q96PB1 797 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 CCDC113Q9H0I3 377 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 POLD4Q9HCU8 107 aa22.62■■□□□ 1.21
CCS-208ENST00000533244 TFIP11Q9UBB9 837 aaKnown RBP22.62■■□□□ 1.21
CCS-208ENST00000533244 TBKBP1A7MCY6 615 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 PPP6R2O75170 966 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 RB1P06400 928 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 BMPR1AP36894 532 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 BECN1Q14457 450 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 STK38Q15208 465 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 SPECC1Q5M775 1068 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 ATL3Q6DD88 541 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 MRPL10Q7Z7H8 261 aaKnown RBP22.61■■□□□ 1.21
CCS-208ENST00000533244 ZBTB8OSQ8IWT0 167 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 SYMPKQ92797 1274 aaKnown RBP22.61■■□□□ 1.21
CCS-208ENST00000533244 IFT74Q96LB3 600 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 DRC1Q96MC2 740 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 PRMT7Q9NVM4 692 aaPredicted RBP22.61■■□□□ 1.21
CCS-208ENST00000533244 ZDHHC9Q9Y397 364 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 MTCH2Q9Y6C9 303 aa22.61■■□□□ 1.21
CCS-208ENST00000533244 H3BNC9 293 aa22.6■■□□□ 1.21
CCS-208ENST00000533244 SPTLC2O15270 562 aa22.6■■□□□ 1.21
CCS-208ENST00000533244 B4GALT5O43286 388 aa22.6■■□□□ 1.21
CCS-208ENST00000533244 ARF4P18085 180 aaPredicted RBP22.6■■□□□ 1.21
CCS-208ENST00000533244 ARSHQ5FYA8 562 aa22.6■■□□□ 1.21
CCS-208ENST00000533244 NOTUMQ6P988 496 aa22.6■■□□□ 1.21
CCS-208ENST00000533244 RSPH1Q8WYR4 309 aa22.6■■□□□ 1.21
CCS-208ENST00000533244 RAD54LQ92698 747 aa22.6■■□□□ 1.21
CCS-208ENST00000533244 C17orf75Q9HAS0 396 aa22.6■■□□□ 1.21
CCS-208ENST00000533244 LMCD1Q9NZU5 365 aa22.6■■□□□ 1.21
CCS-208ENST00000533244 PCDHB2Q9Y5E7 798 aa22.6■■□□□ 1.21
CCS-208ENST00000533244 PRRC2BQ5JSZ5 2229 aaKnown RBP22.6■■□□□ 1.21
CCS-208ENST00000533244 SSBP05455 408 aaKnown RBP eCLIP22.59■■□□□ 1.21
CCS-208ENST00000533244 IGFBP4P22692 258 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms