RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CMA1P23946 247 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 DNAJB2P25686 324 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 HOXA11P31270 313 aaPredicted RBP13.25□□□□□ -0.29
SSBP3-214ENST00000533209 NPTX2P47972 431 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 SARSP49591 514 aaKnown RBP13.25□□□□□ -0.29
SSBP3-214ENST00000533209 FAM189BP81408 668 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
SSBP3-214ENST00000533209 GIT2Q14161 759 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 RAB30Q15771 203 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 FAM117BQ6P1L5 589 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 SLC24A5Q71RS6 500 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 SV2BQ7L1I2 683 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 KIFC3Q9BVG8 833 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 C2orf40Q9H1Z8 148 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 C17orf75Q9HAS0 396 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 CHST12Q9NRB3 414 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 C1orf112Q9NSG2 853 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 AGPAT5Q9NUQ2 364 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 FAM13BQ9NYF5 915 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 ODF2LQ9ULJ1 636 aa13.25□□□□□ -0.29
SSBP3-214ENST00000533209 PIN4Q9Y237 131 aaKnown RBP13.25□□□□□ -0.29
SSBP3-214ENST00000533209 MYMKA6NI61 221 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 B4GALT5O43286 388 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 TLL1O43897 1013 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 TSPAN1O60635 241 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 PLS3P13797 630 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 ZNF131P52739 623 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 PEX3P56589 373 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 HTRA4P83105 476 aaPredicted RBP13.24□□□□□ -0.29
SSBP3-214ENST00000533209 PCBP1Q15365 356 aaKnown RBP eCLIP13.24□□□□□ -0.29
SSBP3-214ENST00000533209 FAM187BQ17R55 369 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 NPAS4Q8IUM7 802 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 IQUBQ8NA54 791 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 DEPTORQ8TB45 409 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 SPIRE2Q8WWL2 714 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 DHX58Q96C10 678 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
SSBP3-214ENST00000533209 RAD9AQ99638 391 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 NTPCRQ9BSD7 190 aaKnown RBP13.24□□□□□ -0.29
SSBP3-214ENST00000533209 ZBED2Q9BTP6 218 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 CCDC113Q9H0I3 377 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 NKX2-4Q9H2Z4 354 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 FZD8Q9H461 694 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 ARHGAP28Q9P2N2 729 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 MSRAQ9UJ68 235 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 KCNH3Q9ULD8 1083 aa13.24□□□□□ -0.29
SSBP3-214ENST00000533209 PTPRSQ13332 1948 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 A0A0U1RQF3 1178 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 FAM237AA0A1B0GTK4 181 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 A0A1B0GVL5 298 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 A0A1W2PQ27 194 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 A0A1W2PQ64 194 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 A0A1W2PQD8 194 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 LCHNA4D1U4 455 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 TTLL13PA6NNM8 815 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 CCDC169A6NNP5 214 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 POLR2DO15514 142 aaKnown RBP13.23□□□□□ -0.29
SSBP3-214ENST00000533209 ERLIN2O94905 339 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 ARHGEF15O94989 841 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 EDN1P05305 212 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 PRKCBP05771 671 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 KRT18P05783 430 aaKnown RBP13.23□□□□□ -0.29
SSBP3-214ENST00000533209 PFKFB1P16118 471 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 EFNA5P52803 228 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 DMP1Q13316 513 aaPredicted RBP13.23□□□□□ -0.29
SSBP3-214ENST00000533209 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 DYMQ7RTS9 669 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 TAS1R3Q7RTX0 852 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 DDX12PQ92771 950 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 TIFAQ96CG3 184 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 DNAJC19Q96DA6 116 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 CPB2Q96IY4 423 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 TRAIPQ9BWF2 469 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 RC3H2Q9HBD1 1191 aaKnown RBP13.23□□□□□ -0.29
SSBP3-214ENST00000533209 KMT5AQ9NQR1 393 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 PRMT7Q9NVM4 692 aaPredicted RBP13.23□□□□□ -0.29
SSBP3-214ENST00000533209 KBTBD4Q9NVX7 518 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 DACT1Q9NYF0 836 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 HPSEQ9Y251 543 aa13.23□□□□□ -0.29
SSBP3-214ENST00000533209 TTC3P53804 2025 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 SLC16A4O15374 487 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 DGKIO75912 1065 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 FAM13AO94988 1023 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 CA3P07451 260 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 STAG3L1P0CL83 205 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 ATF7P17544 494 aaPredicted RBP13.22□□□□□ -0.29
SSBP3-214ENST00000533209 ARF4P18085 180 aaPredicted RBP13.22□□□□□ -0.29
SSBP3-214ENST00000533209 IBSPP21815 317 aaPredicted RBP13.22□□□□□ -0.29
SSBP3-214ENST00000533209 AXLP30530 894 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 MAPK6Q16659 721 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 UBXN11Q5T124 520 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 TWF2Q6IBS0 349 aaKnown RBP13.22□□□□□ -0.29
SSBP3-214ENST00000533209 ZNF598Q86UK7 904 aaKnown RBP13.22□□□□□ -0.29
SSBP3-214ENST00000533209 TMEM161BQ8NDZ6 487 aa13.22□□□□□ -0.29
SSBP3-214ENST00000533209 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
SSBP3-214ENST00000533209 STAMQ92783 540 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms