RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 CTTNQ14247 550 aaKnown RBP19.92■□□□□ 0.78
PCF11-206ENST00000533018 BMS1Q14692 1282 aaKnown RBP19.92■□□□□ 0.78
PCF11-206ENST00000533018 EPHA7Q15375 998 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 TMEM87AQ8NBN3 555 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 VN1R2Q8NFZ6 395 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 PRPF31Q8WWY3 499 aaKnown RBP19.92■□□□□ 0.78
PCF11-206ENST00000533018 PSPC1Q8WXF1 523 aaKnown RBP19.92■□□□□ 0.78
PCF11-206ENST00000533018 TMEM169Q96HH4 297 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 DYDC2Q96IM9 177 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 RPGRIP1Q96KN7 1286 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 FAM105AQ9NUU6 356 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 RGL1Q9NZL6 768 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 WRAP73Q9P2S5 460 aaPredicted RBP19.92■□□□□ 0.78
PCF11-206ENST00000533018 TRIM29Q14134 588 aa19.91■□□□□ 0.78
PCF11-206ENST00000533018 SMC1AQ14683 1233 aaKnown RBP19.91■□□□□ 0.78
PCF11-206ENST00000533018 ME3Q16798 604 aa19.91■□□□□ 0.78
PCF11-206ENST00000533018 XKR9Q5GH70 373 aa19.91■□□□□ 0.78
PCF11-206ENST00000533018 GLB1LQ6UWU2 654 aa19.91■□□□□ 0.78
PCF11-206ENST00000533018 TPH2Q8IWU9 490 aa19.91■□□□□ 0.78
PCF11-206ENST00000533018 C4orf19Q8IY42 314 aa19.91■□□□□ 0.78
PCF11-206ENST00000533018 SLC39A11Q8N1S5 342 aa19.91■□□□□ 0.78
PCF11-206ENST00000533018 PHF7Q9BWX1 381 aaPredicted RBP19.91■□□□□ 0.78
PCF11-206ENST00000533018 ZSWIM4Q9H7M6 989 aa19.91■□□□□ 0.78
PCF11-206ENST00000533018 ARIH1Q9Y4X5 557 aaPredicted RBP19.91■□□□□ 0.78
PCF11-206ENST00000533018 MUC6Q6W4X9 2439 aa19.91■□□□□ 0.78
PCF11-206ENST00000533018 LARGE1O95461 756 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 FDPSP14324 419 aaKnown RBP19.9■□□□□ 0.78
PCF11-206ENST00000533018 RAB27AP51159 221 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 NEK4P51957 841 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 LAMTOR4Q0VGL1 99 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 HERC4Q5GLZ8 1057 aaPredicted RBP19.9■□□□□ 0.78
PCF11-206ENST00000533018 ANKRD54Q6NXT1 300 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 GTF3C6Q969F1 213 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 PGBD4Q96DM1 585 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 TRAIPQ9BWF2 469 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 GBP3Q9H0R5 595 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 DHX33Q9H6R0 707 aaKnown RBP19.9■□□□□ 0.78
PCF11-206ENST00000533018 IFT122Q9HBG6 1241 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 PPME1Q9Y570 386 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 WDFY4Q6ZS81 3184 aa19.9■□□□□ 0.78
PCF11-206ENST00000533018 EMC2Q15006 297 aa19.89■□□□□ 0.77
PCF11-206ENST00000533018 CALCRLQ16602 461 aa19.89■□□□□ 0.77
PCF11-206ENST00000533018 NOMO2Q5JPE7 1267 aa19.89■□□□□ 0.77
PCF11-206ENST00000533018 SRGAP1Q7Z6B7 1085 aa19.89■□□□□ 0.77
PCF11-206ENST00000533018 MRPL43Q8N983 215 aaKnown RBP19.89■□□□□ 0.77
PCF11-206ENST00000533018 TCP11Q8WWU5 503 aa19.89■□□□□ 0.77
PCF11-206ENST00000533018 MTRQ99707 1265 aa19.89■□□□□ 0.77
PCF11-206ENST00000533018 PCDHA12Q9UN75 941 aa19.89■□□□□ 0.77
PCF11-206ENST00000533018 PCDHB2Q9Y5E7 798 aa19.89■□□□□ 0.77
PCF11-206ENST00000533018 C2orf71A6NGG8 1288 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 MEIS3P2A8K0S8 358 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 LOC730098B7Z3J9 87 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 ZBTB39O15060 712 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 CXCL14O95715 111 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 CBX2Q14781 532 aaPredicted RBP19.88■□□□□ 0.77
PCF11-206ENST00000533018 TMEM184AQ6ZMB5 413 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 VPS52Q8N1B4 723 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 RNF149Q8NC42 400 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 RSPH1Q8WYR4 309 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 CCDC43Q96MW1 224 aaKnown RBP19.88■□□□□ 0.77
PCF11-206ENST00000533018 AGPAT5Q9NUQ2 364 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 TBC1D13Q9NVG8 400 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 ARID2Q68CP9 1835 aa19.88■□□□□ 0.77
PCF11-206ENST00000533018 BTBD18B2RXH4 712 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 ASAP2O43150 1006 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 GAS2O43903 313 aaKnown RBP19.87■□□□□ 0.77
PCF11-206ENST00000533018 JAK2O60674 1132 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 EIF5BO60841 1220 aaKnown RBP19.87■□□□□ 0.77
PCF11-206ENST00000533018 ZNF623O75123 536 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 OFD1O75665 1012 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 KCNC3Q14003 757 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 HFE2Q6ZVN8 426 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 DIS3L2Q8IYB7 885 aaKnown RBP19.87■□□□□ 0.77
PCF11-206ENST00000533018 NSUN7Q8NE18 718 aaKnown RBP19.87■□□□□ 0.77
PCF11-206ENST00000533018 URGCPQ8TCY9 931 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 EDAQ92838 391 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 CASP10Q92851 521 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 FAM193BQ96PV7 902 aaPredicted RBP19.87■□□□□ 0.77
PCF11-206ENST00000533018 EIF2AK1Q9BQI3 630 aaKnown RBP19.87■□□□□ 0.77
PCF11-206ENST00000533018 NRDE2Q9H7Z3 1164 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 MINDY3Q9H8M7 445 aa19.87■□□□□ 0.77
PCF11-206ENST00000533018 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.86■□□□□ 0.77
PCF11-206ENST00000533018 CARNS1A5YM72 827 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 ERLIN2O94905 339 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 SLITRK3O94933 977 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 HOXB8P17481 243 aaPredicted RBP19.86■□□□□ 0.77
PCF11-206ENST00000533018 SP100P23497 879 aaPredicted RBP19.86■□□□□ 0.77
PCF11-206ENST00000533018 TXKP42681 527 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 SPIRE1Q08AE8 756 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 TPRNQ4KMQ1 711 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 CES5AQ6NT32 575 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 SYCE2Q6PIF2 218 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 FERMT3Q86UX7 667 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 SUSD6Q92537 303 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 TNFRSF25Q93038 417 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 IGSF21Q96ID5 467 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 MFSD14AQ96MC6 490 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 S1PR5Q9H228 398 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 TTC12Q9H892 705 aaPredicted RBP19.86■□□□□ 0.77
PCF11-206ENST00000533018 TSHZ2Q9NRE2 1034 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms