RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 API5Q9BZZ5 524 aaKnown RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 ECHDC1Q9NTX5 307 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 A0A0A0MRY4 1105 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 STXBP3O00186 592 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 LZTS3O60299 673 aaPredicted RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 FGF18O76093 207 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 KCNJ4P48050 445 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 ARSDP51689 593 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 HDAC1Q13547 482 aaPredicted RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 KREMEN2Q8NCW0 462 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 PJA1Q8NG27 643 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 LNX1Q8TBB1 728 aaPredicted RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 AUTS2Q8WXX7 1259 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 PPM1EQ8WY54 764 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 ZC3H10Q96K80 434 aaKnown RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 MAP3K14Q99558 947 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 MRS2Q9HD23 443 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 WDR6Q9NNW5 1121 aaKnown RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 HSPBP1Q9NZL4 362 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 DKK4Q9UBT3 224 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 ZHX1Q9UKY1 873 aaPredicted RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 MTUS1Q9ULD2 1270 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 SORCS3Q9UPU3 1222 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 R4GN57 208 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 DNAH9Q9NYC9 4486 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 TEX28O15482 410 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 ABLIM3O94929 683 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 PLEKHA8P1O95397 391 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 TXNP10599 105 aaKnown RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 CTSAP10619 480 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 GHRP10912 638 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 FDPSP14324 419 aaKnown RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 RPS9P46781 194 aaKnown RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 FCHO2Q0JRZ9 810 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 SRSF5Q13243 272 aaKnown RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 COL9A2Q14055 689 aaPredicted RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 GJA10Q969M2 543 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 ZFRQ96KR1 1074 aaKnown RBP2.06□□□□□ -2.08
KNL1-211ENST00000533001 SPZ1Q9BXG8 430 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 CCDC113Q9H0I3 377 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 CHST12Q9NRB3 414 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 SMC4Q9NTJ3 1288 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 LRP2BPQ9P2M1 347 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 TBX20Q9UMR3 447 aa2.06□□□□□ -2.08
KNL1-211ENST00000533001 NUP210LQ5VU65 1888 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 SRFP11831 508 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 INSRRP14616 1297 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 ENPP2Q13822 863 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 KIAA1211Q6ZU35 1233 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 OLIG1Q8TAK6 271 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 KIF1BPQ96EK5 621 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 FAM83CQ9BQN1 747 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 TMEM74BQ9NUR3 256 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 WNT16Q9UBV4 365 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 TRPM6Q9BX84 2022 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 NKRFO15226 690 aaKnown RBP eCLIP2.05□□□□□ -2.08
KNL1-211ENST00000533001 DTNBO60941 627 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 CSDE1O75534 798 aaKnown RBP2.05□□□□□ -2.08
KNL1-211ENST00000533001 LAMP2P13473 410 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 GPC3P51654 580 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 PTPN5P54829 565 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 ARHGAP4P98171 946 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 RING1Q06587 406 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 GPM6BQ13491 265 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 TKFCQ3LXA3 575 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 BHLHA9Q7RTU4 235 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 RASSF3Q86WH2 238 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 ECHDC2Q86YB7 292 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 CERS3Q8IU89 383 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 ADSSL1Q8N142 457 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 ITFG1Q8TB96 612 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 MRPS27Q92552 414 aaKnown RBP2.05□□□□□ -2.08
KNL1-211ENST00000533001 OSBPL6Q9BZF3 934 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 LSG1Q9H089 658 aaKnown RBP2.05□□□□□ -2.08
KNL1-211ENST00000533001 CD93Q9NPY3 652 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 RAI14Q9P0K7 980 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 FBXO40Q9UH90 709 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 ARHGEF37A1IGU5 675 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 PRAMEF12O95522 483 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 GGPS1O95749 300 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 BAG3O95817 575 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 IGFBP4P22692 258 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 SLC11A1P49279 550 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 CLUL1Q15846 466 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 PCNX4Q63HM2 1172 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 KCNT2Q6UVM3 1135 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 Q6ZS52 159 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 MIB1Q86YT6 1006 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 FRMD1Q8N878 549 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 MMTAG2Q9BU76 263 aaKnown RBP2.05□□□□□ -2.08
KNL1-211ENST00000533001 NIFKQ9BYG3 293 aaKnown RBP2.05□□□□□ -2.08
KNL1-211ENST00000533001 TRIM9Q9C026 710 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 HCFC1R1Q9NWW0 138 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 TMEM161AQ9NX61 479 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 TMOD2Q9NZR1 351 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 CCER2I3L3R5 266 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 OLFM2O95897 454 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 SPATA31C1P0DKV0 1188 aa2.05□□□□□ -2.08
KNL1-211ENST00000533001 HMGA1P17096 107 aaKnown RBP2.05□□□□□ -2.08
KNL1-211ENST00000533001 ITGB6P18564 788 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms