RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 CASP10Q92851 521 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 TMEM169Q96HH4 297 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 INO80BQ9C086 356 aaPredicted RBP19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 ZBP1Q9H171 429 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 KCNH6Q9H252 994 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 NRDE2Q9H7Z3 1164 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 IFT122Q9HBG6 1241 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 TBC1D13Q9NVG8 400 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 TPCN1Q9ULQ1 816 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 COL4A3BPQ9Y5P4 624 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 STK36Q9NRP7 1315 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 FAM205CA6NFA0 338 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 B4GALT3O60512 393 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 CCNT1O60563 726 aaKnown RBP19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 CDKL5O76039 1030 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 HOXB8P17481 243 aaPredicted RBP19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 NOMO2Q5JPE7 1267 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 PPP4R3AQ6IN85 833 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 GLB1LQ6UWU2 654 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 POTEDQ86YR6 584 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 VPS52Q8N1B4 723 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 TMEM143Q96AN5 459 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 PBXIP1Q96AQ6 731 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 CEP170P1Q96L14 293 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 FAM20AQ96MK3 541 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 JPH2Q9BR39 696 aaPredicted RBP19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 AGPAT5Q9NUQ2 364 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 DNAJB4Q9UDY4 337 aa19.13■□□□□ 0.65
RPUSD4-207ENST00000532800 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 OFD1O75665 1012 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 CTDNEP1O95476 244 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 CXCL14O95715 111 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 P4HBP07237 508 aaKnown RBP19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 SKIP12755 728 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 GCFC2P16383 781 aaKnown RBP19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 POLGP54098 1239 aaPredicted RBP19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 PTPN21Q16825 1174 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 IER5LQ5T953 404 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 SLC7A3Q8WY07 619 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 LXNQ9BS40 222 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 GBP3Q9H0R5 595 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 POMKQ9H5K3 350 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 DHX33Q9H6R0 707 aaKnown RBP19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 MINDY3Q9H8M7 445 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 TSHZ2Q9NRE2 1034 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 RGL1Q9NZL6 768 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 ZDBF2Q9HCK1 2354 aa19.12■□□□□ 0.65
RPUSD4-207ENST00000532800 PFKFB2O60825 505 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 ZNF623O75123 536 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 GALTP07902 379 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 WEE2P0C1S8 567 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 SRGAP2CP0DJJ0 459 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 SLC11A1P49279 550 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 MRE11P49959 708 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 RAB27AP51159 221 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 SIGLEC14Q08ET2 396 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 TPRNQ4KMQ1 711 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 NCAPH2Q6IBW4 605 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 AGMOQ6ZNB7 445 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 ZNF280BQ86YH2 543 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 PRSS33Q8NF86 280 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 PRPF31Q8WWY3 499 aaKnown RBP19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 ASIC4Q96FT7 647 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 IGSF21Q96ID5 467 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 VN1R3Q9BXE9 311 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 PCDHB2Q9Y5E7 798 aa19.11■□□□□ 0.65
RPUSD4-207ENST00000532800 ZBTB39O15060 712 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 DKC1O60832 514 aaKnown RBP eCLIP19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 CTSAP10619 480 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 EPCAMP16422 314 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 XBP1P17861 261 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 KCNA4P22459 653 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 YWHABP31946 246 aaKnown RBP19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 AFF1P51825 1210 aaKnown RBP19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 CYP4A11Q02928 519 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 RNASELQ05823 741 aaKnown RBP19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 SPIRE1Q08AE8 756 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 LAMTOR4Q0VGL1 99 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 NR5A1Q13285 461 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 CTTNQ14247 550 aaKnown RBP19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 EPHA7Q15375 998 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 RARS2Q5T160 578 aaKnown RBP19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 KANK3Q6NY19 840 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 DDX53Q86TM3 631 aaKnown RBP19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 C4orf19Q8IY42 314 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 C12orf76Q8N812 135 aaPredicted RBP19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 FEZF2Q8TBJ5 459 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 PSPC1Q8WXF1 523 aaKnown RBP19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 RSPH1Q8WYR4 309 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 DYDC2Q96IM9 177 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 ADAM7Q9H2U9 754 aa19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 ORC3Q9UBD5 711 aaPredicted RBP19.1■□□□□ 0.65
RPUSD4-207ENST00000532800 C2CD4DB7Z1M9 353 aa19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 TBX3O15119 743 aa19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 MARCH6O60337 910 aa19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 HOXA11P31270 313 aaPredicted RBP19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 RFC5P40937 340 aa19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 EMC2Q15006 297 aa19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 UBXN11Q5T124 520 aa19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 CES5AQ6NT32 575 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms