RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	USP15	Q9Y4E8	981 aa	Predicted RBP	10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	REV3L	O60673	3130 aa		10.82	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ZNF862	O60290	1169 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TDP2	O95551	362 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TEC	P42680	631 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ALDH7A1	P49419	539 aa	Known RBP	10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PSMC5	P62195	406 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TOB2	Q14106	344 aa	Predicted RBP	10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	DSC3	Q14574	896 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SMC1A	Q14683	1233 aa	Known RBP	10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	UGCG	Q16739	394 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	DUSP6	Q16828	381 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	LETM2	Q2VYF4	491 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TWF2	Q6IBS0	349 aa	Known RBP	10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	MOXD1	Q6UVY6	613 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ZBTB33	Q86T24	672 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	RHPN2	Q8IUC4	686 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	EXOC8	Q8IYI6	725 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	DAGLB	Q8NCG7	672 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	RSPH1	Q8WYR4	309 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TMEM169	Q96HH4	297 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	RPGRIP1	Q96KN7	1286 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CASD1	Q96PB1	797 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	NAP1L4	Q99733	375 aa	Known RBP	10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PHF7	Q9BWX1	381 aa	Predicted RBP	10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	NIFK	Q9BYG3	293 aa	Known RBP	10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	KCNH6	Q9H252	994 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ADAMTS10	Q9H324	1103 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CWH43	Q9H720	699 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CHST12	Q9NRB3	414 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PDRG1	Q9NUG6	133 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SPG21	Q9NZD8	308 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PCDHGC5	Q9Y5F6	944 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ARID2	Q68CP9	1835 aa		10.81	□□□□□ -0.68
PPFIA1-223	ENST00000532793		A0A0U1RQF3	1178 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	DDX11L8	A8MPP1	907 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PSMD10	O75832	226 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	GLP2R	O95838	553 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ATF7	P17544	494 aa	Predicted RBP	10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	FGFR4	P22455	802 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	RAB27A	P51159	221 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ERVFC1	P60507	584 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	RNASEL	Q05823	741 aa	Known RBP	10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	INF2	Q27J81	1249 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CES5A	Q6NT32	575 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	LLGL2	Q6P1M3	1020 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ZNF410	Q86VK4	478 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SUGP1	Q8IWZ8	645 aa	Known RBP	10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	LINC01465	Q8N7H1	131 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	HELQ	Q8TDG4	1101 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SLC7A3	Q8WY07	619 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CASP10	Q92851	521 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	GJA10	Q969M2	543 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	NLRP4	Q96MN2	994 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TM6SF1	Q9BZW5	370 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	BRMS1	Q9HCU9	246 aa		10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PIN4	Q9Y237	131 aa	Known RBP	10.8	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793		A0A087WZ62	844 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	FSCN2	O14926	492 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	BAG4	O95429	457 aa	Known RBP	10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	GCFC2	P16383	781 aa	Known RBP	10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	HOXB8	P17481	243 aa	Predicted RBP	10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CYP3A7	P24462	503 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	POLG	P54098	1239 aa	Predicted RBP	10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	GIT2	Q14161	759 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CBX2	Q14781	532 aa	Predicted RBP	10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TPRN	Q4KMQ1	711 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ANKRD54	Q6NXT1	300 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	GLB1L	Q6UWU2	654 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TREML4	Q6UXN2	200 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CATSPER4	Q7RTX7	472 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	NEK8	Q86SG6	692 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	WASF1	Q92558	559 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	EDA	Q92838	391 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PGBD4	Q96DM1	585 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	FAM20A	Q96MK3	541 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SH2D3A	Q9BRG2	576 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	FDXACB1	Q9BRP7	624 aa	Predicted RBP	10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	LARP6	Q9BRS8	491 aa	Known RBP	10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SUCLA2	Q9P2R7	463 aa	Predicted RBP	10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	NR2E1	Q9Y466	385 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PCDHGA10	Q9Y5H3	936 aa		10.79	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TDRD15	B5MCY1	1934 aa	Known RBP	10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	LOC730098	B7Z3J9	87 aa		10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CCNT1	O60563	726 aa	Known RBP	10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	MAF	O75444	373 aa	Predicted RBP	10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CSDE1	O75534	798 aa	Known RBP	10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	PBX3	P40426	434 aa		10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	QARS	P47897	775 aa	Known RBP	10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	ANKRD1	Q15327	319 aa		10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	TARBP2	Q15633	366 aa	Known RBP	10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	CLLU1OS	Q5K130	101 aa		10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	LRRC55	Q6ZSA7	311 aa		10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	HFE2	Q6ZVN8	426 aa		10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	OTUD6A	Q7L8S5	288 aa		10.78	□□□□□ -0.68
PPFIA1-223	ENST00000532793	SLC39A11	Q8N1S5	342 aa		10.78	□□□□□ -0.68

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