RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CLDND1Q9NY35 253 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 HCSTQ9UBK5 93 aa19.17■□□□□ 0.66
PHRF1-204ENST00000532550 PUF60Q9UHX1 559 aaKnown RBP19.17■□□□□ 0.66
PHRF1-204ENST00000532550 H3BQV1 296 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 ZNF623O75123 536 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 ATF7P17544 494 aaPredicted RBP19.16■□□□□ 0.66
PHRF1-204ENST00000532550 RPA1P27694 616 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 ARL2P36404 184 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 TOB1P50616 345 aaPredicted RBP19.16■□□□□ 0.66
PHRF1-204ENST00000532550 PTENP60484 403 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 POU5F1BQ06416 359 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 PTGDRQ13258 359 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 NBR1Q14596 966 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 LONRF3Q496Y0 759 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 KCNT2Q6UVM3 1135 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 C4orf32Q8N8J7 132 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 PGBD4Q96DM1 585 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 ZNF558Q96NG5 402 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 MRPL9Q9BYD2 267 aaKnown RBP19.16■□□□□ 0.66
PHRF1-204ENST00000532550 LRWD1Q9UFC0 647 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 DBR1Q9UK59 544 aaKnown RBP19.16■□□□□ 0.66
PHRF1-204ENST00000532550 SMC3Q9UQE7 1217 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.16■□□□□ 0.66
PHRF1-204ENST00000532550 ARID2Q68CP9 1835 aa19.16■□□□□ 0.66
PHRF1-204ENST00000532550 USO1O60763 962 aaKnown RBP19.15■□□□□ 0.66
PHRF1-204ENST00000532550 ERLIN2O94905 339 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 FXR2P51116 673 aaKnown RBP eCLIP19.15■□□□□ 0.667e-6■■□□□ 13.4
PHRF1-204ENST00000532550 KRT17Q04695 432 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 HYAL1Q12794 435 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 PDIA5Q14554 519 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 PCBP1Q15365 356 aaKnown RBP eCLIP19.15■□□□□ 0.66
PHRF1-204ENST00000532550 PUS10Q3MIT2 529 aaKnown RBP19.15■□□□□ 0.66
PHRF1-204ENST00000532550 HAUS3Q68CZ6 603 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 MAEAQ7L5Y9 396 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.15■□□□□ 0.66
PHRF1-204ENST00000532550 RSPH1Q8WYR4 309 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 LPPQ93052 612 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 NECAB3Q96P71 396 aaPredicted RBP19.15■□□□□ 0.66
PHRF1-204ENST00000532550 RAB34Q9BZG1 259 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 PCDHB6Q9Y5E3 794 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 PCDHB2Q9Y5E7 798 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 STK24Q9Y6E0 443 aa19.15■□□□□ 0.66
PHRF1-204ENST00000532550 H3BQ06 376 aaPredicted RBP19.14■□□□□ 0.65
PHRF1-204ENST00000532550 INO80B-WBP1J3KQ70 363 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 LAD1O00515 517 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 MUTP22033 750 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 HOXA11P31270 313 aaPredicted RBP19.14■□□□□ 0.65
PHRF1-204ENST00000532550 IRS1P35568 1242 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 PPM1AP35813 382 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 CCT6AP40227 531 aaKnown RBP19.14■□□□□ 0.65
PHRF1-204ENST00000532550 ALDH7A1P49419 539 aaKnown RBP19.14■□□□□ 0.65
PHRF1-204ENST00000532550 PLCB3Q01970 1234 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 COL19A1Q14993 1142 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 PTCRAQ6ISU1 281 aaPredicted RBP19.14■□□□□ 0.65
PHRF1-204ENST00000532550 GLB1LQ6UWU2 654 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 MCPH1Q8NEM0 835 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 ASAP3Q8TDY4 903 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 TLR9Q9NR96 1032 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 SPG21Q9NZD8 308 aa19.14■□□□□ 0.65
PHRF1-204ENST00000532550 GLRA2P23416 452 aa19.13■□□□□ 0.65
PHRF1-204ENST00000532550 AXLP30530 894 aa19.13■□□□□ 0.65
PHRF1-204ENST00000532550 CAPSQ13938 189 aa19.13■□□□□ 0.65
PHRF1-204ENST00000532550 CTC1Q2NKJ3 1217 aa19.13■□□□□ 0.65
PHRF1-204ENST00000532550 RILPL1Q5EBL4 403 aa19.13■□□□□ 0.65
PHRF1-204ENST00000532550 LARP1BQ659C4 914 aaKnown RBP19.13■□□□□ 0.65
PHRF1-204ENST00000532550 PDE12Q6L8Q7 609 aaKnown RBP19.13■□□□□ 0.65
PHRF1-204ENST00000532550 POTEGQ6S5H5 508 aa19.13■□□□□ 0.65
PHRF1-204ENST00000532550 RBM23Q86U06 439 aaKnown RBP19.13■□□□□ 0.65
PHRF1-204ENST00000532550 IFNLR1Q8IU57 520 aaPredicted RBP19.13■□□□□ 0.65
PHRF1-204ENST00000532550 MRPS27Q92552 414 aaKnown RBP19.13■□□□□ 0.65
PHRF1-204ENST00000532550 POLR3FQ9H1D9 316 aaPredicted RBP19.13■□□□□ 0.65
PHRF1-204ENST00000532550 LZTS1Q9Y250 596 aa19.13■□□□□ 0.65
PHRF1-204ENST00000532550 PLXNA4Q9HCM2 1894 aa19.13■□□□□ 0.65
PHRF1-204ENST00000532550 ATG2AQ2TAZ0 1938 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 ARHGEF35A5YM69 484 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 GTF2F1P35269 517 aaKnown RBP eCLIP19.12■□□□□ 0.65
PHRF1-204ENST00000532550 NRIP1P48552 1158 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 ERVFC1P60507 584 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 ADAM15Q13444 863 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 NOMO2Q5JPE7 1267 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 PADI6Q6TGC4 694 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 DTHD1Q6ZMT9 781 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 MRPL10Q7Z7H8 261 aaKnown RBP19.12■□□□□ 0.65
PHRF1-204ENST00000532550 CNNM3Q8NE01 707 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 NFKBIZQ9BYH8 718 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 TLE6Q9H808 572 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 FAM50BQ9Y247 325 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 INPP5FQ9Y2H2 1132 aa19.12■□□□□ 0.65
PHRF1-204ENST00000532550 CARNS1A5YM72 827 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 GRXCR2A6NFK2 248 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 TSPAN1O60635 241 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 OFD1O75665 1012 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 LTBRP36941 435 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 PBX3P40426 434 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 BCAR1P56945 870 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 RNASELQ05823 741 aaKnown RBP19.11■□□□□ 0.65
PHRF1-204ENST00000532550 KRT79Q5XKE5 535 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 NOTUMQ6P988 496 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 ADGRD2Q7Z7M1 963 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 IGSF22Q8N9C0 903 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms