RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 FAM43BQ6ZT52 329 aaPredicted RBP17.23■□□□□ 0.35
CTSB-225ENST00000532409 KCNK18Q7Z418 384 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 COL25A1Q9BXS0 654 aaPredicted RBP17.23■□□□□ 0.35
CTSB-225ENST00000532409 TMEM117Q9H0C3 514 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 BHMT2Q9H2M3 363 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 CWH43Q9H720 699 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 CHST12Q9NRB3 414 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 FAM105AQ9NUU6 356 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 DACT1Q9NYF0 836 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 RWDD3Q9Y3V2 267 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 PLXNA4Q9HCM2 1894 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 VWA3AA6NCI4 1184 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 E9PMD0 336 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 INO80B-WBP1J3KQ70 363 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 B4GALT5O43286 388 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 TSPAN1O60635 241 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 SYT1P21579 422 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 MBTD1Q05BQ5 628 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 PTPROQ16827 1216 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 TCEAL5Q5H9L2 206 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 FAM173BQ6P4H8 233 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 CPB2Q96IY4 423 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 PLIN2Q99541 437 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 PLVAPQ9BX97 442 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 PCDHB2Q9Y5E7 798 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 PCDHGC5Q9Y5F6 944 aa17.22■□□□□ 0.35
CTSB-225ENST00000532409 DLL1O00548 723 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 CYP11B2P19099 503 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 IRS1P35568 1242 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 KCNQ1P51787 676 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 GRIN1Q05586 938 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 TFDP1Q14186 410 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 AMHR2Q16671 573 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 KRT79Q5XKE5 535 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 CDR2LQ86X02 465 aaPredicted RBP17.21■□□□□ 0.35
CTSB-225ENST00000532409 ABI1Q8IZP0 508 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 MCPH1Q8NEM0 835 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 SPPL3Q8TCT6 385 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 PNMA5Q96PV4 448 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 EIF2AQ9BY44 585 aaKnown RBP17.21■□□□□ 0.35
CTSB-225ENST00000532409 RAB34Q9BZG1 259 aa17.21■□□□□ 0.35
CTSB-225ENST00000532409 LRRIQ4A6NIV6 560 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 HOXA2O43364 376 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 ERLIN2O94905 339 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 EOMESO95936 686 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 AFF1P51825 1210 aaKnown RBP17.2■□□□□ 0.34
CTSB-225ENST00000532409 RESTQ13127 1097 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 BRAPQ7Z569 592 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 IFNLR1Q8IU57 520 aaPredicted RBP17.2■□□□□ 0.34
CTSB-225ENST00000532409 LRRC43Q8N309 656 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 COLGALT1Q8NBJ5 622 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 P2RX5Q93086 422 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 INTS4Q96HW7 963 aaKnown RBP17.2■□□□□ 0.34
CTSB-225ENST00000532409 ASB2Q96Q27 587 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 KIFC3Q9BVG8 833 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 TRAIPQ9BWF2 469 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 RNF216Q9NWF9 866 aaPredicted RBP17.2■□□□□ 0.34
CTSB-225ENST00000532409 MTMR6Q9Y217 621 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 INPP5FQ9Y2H2 1132 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 USP20Q9Y2K6 914 aa17.2■□□□□ 0.34
CTSB-225ENST00000532409 TCF20Q9UGU0 1960 aaKnown RBP17.2■□□□□ 0.34
CTSB-225ENST00000532409 TTLL13PA6NNM8 815 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 ZNF623O75123 536 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 ARF4P18085 180 aaPredicted RBP17.19■□□□□ 0.34
CTSB-225ENST00000532409 PDCP20941 246 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 MUTP22033 750 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 GTF2F1P35269 517 aaKnown RBP eCLIP17.19■□□□□ 0.34
CTSB-225ENST00000532409 SF3A1Q15459 793 aaKnown RBP17.19■□□□□ 0.34
CTSB-225ENST00000532409 TIGD5Q53EQ6 642 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 TJAP1Q5JTD0 557 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 AGMOQ6ZNB7 445 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 POF1BQ8WVV4 589 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 ATXN2LQ8WWM7 1075 aaKnown RBP17.19■□□□□ 0.34
CTSB-225ENST00000532409 SNX21Q969T3 373 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 RUSC1Q9BVN2 902 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 NSUN3Q9H649 340 aaKnown RBP17.19■□□□□ 0.34
CTSB-225ENST00000532409 HES2Q9Y543 173 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 CLIC4Q9Y696 253 aa17.19■□□□□ 0.34
CTSB-225ENST00000532409 B4GALT3O60512 393 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 OFD1O75665 1012 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 FGF18O76093 207 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 EYA4O95677 639 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 EDN1P05305 212 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 MRPS5P82675 430 aaKnown RBP17.18■□□□□ 0.34
CTSB-225ENST00000532409 POU5F1BQ06416 359 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 ADGRD2Q7Z7M1 963 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 THNSL1Q8IYQ7 743 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 SMG8Q8ND04 991 aaKnown RBP17.18■□□□□ 0.34
CTSB-225ENST00000532409 LRRC15Q8TF66 581 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 HLA-CQ95604 372 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 NFKBIZQ9BYH8 718 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 LMAN2LQ9H0V9 348 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 DNM3Q9UQ16 869 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 PCDHB12Q9Y5F1 795 aa17.18■□□□□ 0.34
CTSB-225ENST00000532409 LAG3P18627 525 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 LIG1P18858 919 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 KCNA5P22460 613 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 RAB27AP51159 221 aa17.17■□□□□ 0.34
CTSB-225ENST00000532409 NAALADL2Q58DX5 795 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms