RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 NOTUMQ6P988 496 aa8.57□□□□□ -1.04
CTNND1-230ENST00000532245 KLRG1Q96E93 195 aa8.57□□□□□ -1.04
CTNND1-230ENST00000532245 TUT1Q9H6E5 874 aaKnown RBP8.57□□□□□ -1.04
CTNND1-230ENST00000532245 IFT122Q9HBG6 1241 aa8.57□□□□□ -1.04
CTNND1-230ENST00000532245 ZNF148Q9UQR1 794 aa8.57□□□□□ -1.04
CTNND1-230ENST00000532245 EPN1Q9Y6I3 576 aaPredicted RBP8.57□□□□□ -1.04
CTNND1-230ENST00000532245 NFKBIEO00221 500 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 GPR182O15218 404 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 U2AF2P26368 475 aaKnown RBP eCLIP8.56□□□□□ -1.041e-10■■□□□ 14
CTNND1-230ENST00000532245 KLRC1P26715 233 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 KCNH2Q12809 1159 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 PGM5Q15124 567 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 NAALADL2Q58DX5 795 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 KCTD6Q8NC69 237 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 SH3TC2Q8TF17 1288 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 SKA2Q8WVK7 121 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 MTG1Q9BT17 334 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 LMCD1Q9NZU5 365 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 FBXO2Q9UK22 296 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 MOCS2O96007 188 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 KRT31Q15323 416 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 ZC2HC1CQ53FD0 456 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 PCNX4Q63HM2 1172 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 KRT39Q6A163 491 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 AMIGO3Q86WK7 504 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 CATSPER3Q86XQ3 398 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 TRIM58Q8NG06 486 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 SEPT5Q99719 369 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 TIPINQ9BVW5 301 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 MRPL47Q9HD33 250 aaKnown RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 ARFGAP3Q9NP61 516 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.56□□□□□ -1.043e-9■□□□□ 10.4
CTNND1-230ENST00000532245 ESYT2A0FGR8 921 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 IKBKBO14920 756 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 NKRFO15226 690 aaKnown RBP eCLIP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 SH3BP5O60239 455 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 KRT1P04264 644 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 TREML2Q5T2D2 321 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 APPL2Q8NEU8 664 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 PPP1R13LQ8WUF5 828 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 SEPT8Q92599 483 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 HSPBP1Q9NZL4 362 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 EMSYQ7Z589 1322 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 KNDC1Q76NI1 1749 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 FDPSP14324 419 aaKnown RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 SLC12A2P55011 1212 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 SARNPP82979 210 aaKnown RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 EHHADHQ08426 723 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 SEC23AQ15436 765 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 FSCN1Q16658 493 aaKnown RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 STMN4Q9H169 189 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 ZWILCHQ9H900 591 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 AAASQ9NRG9 546 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 PRMT7Q9NVM4 692 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 SMIM22K7EJ46 135 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 KRIT1O00522 736 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 PDGFRBP09619 1106 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 HOXA7P31268 230 aaPredicted RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 ADCY8P40145 1251 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 ZNF484Q5JVG2 852 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 GLRA4Q5JXX5 417 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 METTL7BQ6UX53 244 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 DLK2Q6UY11 383 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 GPR142Q7Z601 462 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 HSPH1Q92598 858 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 TMEM169Q96HH4 297 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 VPS37BQ9H9H4 285 aa8.56□□□□□ -1.04
CTNND1-230ENST00000532245 A1CFQ9NQ94 594 aaKnown RBP8.56□□□□□ -1.04
CTNND1-230ENST00000532245 PGK1P00558 417 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 GBP1P32455 592 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 TSTA3Q13630 321 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-230ENST00000532245 PRPSAP1Q14558 356 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 CCT6BQ92526 530 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 RIC1Q4ADV7 1423 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 CSDE1O75534 798 aaKnown RBP8.55□□□□□ -1.04
CTNND1-230ENST00000532245 CTDNEP1O95476 244 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 PSMA2P25787 234 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 SREBF1P36956 1147 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 PPP6R3Q5H9R7 873 aaPredicted RBP8.55□□□□□ -1.04
CTNND1-230ENST00000532245 CAPN12Q6ZSI9 719 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 CTAGE3PQ8IX95 158 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 PRPF31Q8WWY3 499 aaKnown RBP8.55□□□□□ -1.04
CTNND1-230ENST00000532245 TARS2Q9BW92 718 aaKnown RBP8.55□□□□□ -1.04
CTNND1-230ENST00000532245 GPRC5CQ9NQ84 441 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 NR2E3Q9Y5X4 410 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 XRN1Q8IZH2 1706 aaKnown RBP8.55□□□□□ -1.04
CTNND1-230ENST00000532245 KPNA6O60684 536 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 ATP1A3P13637 1013 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 RPA1P27694 616 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 MAN1A1P33908 653 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 OAZ1P54368 228 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 EPHB1P54762 984 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 TINF2Q9BSI4 451 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 ENTPD7Q9NQZ7 604 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 SLC38A7Q9NVC3 462 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 LRRD1A4D1F6 860 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 PIK3R2O00459 728 aa8.55□□□□□ -1.04
CTNND1-230ENST00000532245 ZC3H11AO75152 810 aaKnown RBP eCLIP8.55□□□□□ -1.04
CTNND1-230ENST00000532245 PRKAR2AP13861 404 aaKnown RBP8.55□□□□□ -1.04
CTNND1-230ENST00000532245 TBXAS1P24557 533 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms