RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PRPF40AO75400 957 aaKnown RBP24.6■■□□□ 1.53
LRRK1-208ENST00000532029 IDEP14735 1019 aa24.6■■□□□ 1.53
LRRK1-208ENST00000532029 AFMP43652 599 aa24.6■■□□□ 1.53
LRRK1-208ENST00000532029 NPTX2P47972 431 aa24.6■■□□□ 1.53
LRRK1-208ENST00000532029 KCNJ6P48051 423 aa24.6■■□□□ 1.53
LRRK1-208ENST00000532029 TCTN1Q2MV58 587 aa24.6■■□□□ 1.53
LRRK1-208ENST00000532029 CDCA2Q69YH5 1023 aaPredicted RBP24.6■■□□□ 1.53
LRRK1-208ENST00000532029 MYCT1Q8N699 235 aa24.6■■□□□ 1.53
LRRK1-208ENST00000532029 CNNM3Q8NE01 707 aa24.6■■□□□ 1.53
LRRK1-208ENST00000532029 CCDC34Q96HJ3 373 aa24.6■■□□□ 1.53
LRRK1-208ENST00000532029 CEP290O15078 2479 aa24.6■■□□□ 1.53
LRRK1-208ENST00000532029 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.59■■□□□ 1.53
LRRK1-208ENST00000532029 RBAK-RBAKDNI3L0D1 243 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 ERLIN2O94905 339 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 ZNF202O95125 648 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 ZNF131P52739 623 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 UBE2HP62256 183 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 MBTD1Q05BQ5 628 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 FAM160A1Q05DH4 1040 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 PCBP1Q15365 356 aaKnown RBP eCLIP24.59■■□□□ 1.53
LRRK1-208ENST00000532029 TDHQ8IZJ6 230 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 SPIRE2Q8WWL2 714 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 DNAJC19Q96DA6 116 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 KIFC3Q9BVG8 833 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 TRIM9Q9C026 710 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 PRO3102Q9H379 93 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 MINDY3Q9H8M7 445 aa24.59■■□□□ 1.53
LRRK1-208ENST00000532029 ZSCAN20P17040 1043 aaPredicted RBP24.58■■□□□ 1.53
LRRK1-208ENST00000532029 GAP43P17677 238 aa24.58■■□□□ 1.53
LRRK1-208ENST00000532029 LIG1P18858 919 aa24.58■■□□□ 1.53
LRRK1-208ENST00000532029 EFNA5P52803 228 aa24.58■■□□□ 1.53
LRRK1-208ENST00000532029 ASIC1P78348 528 aa24.58■■□□□ 1.53
LRRK1-208ENST00000532029 NCBP1Q09161 790 aaKnown RBP24.58■■□□□ 1.53
LRRK1-208ENST00000532029 KRBA2Q6ZNG9 492 aa24.58■■□□□ 1.53
LRRK1-208ENST00000532029 CCDC65Q8IXS2 484 aa24.58■■□□□ 1.53
LRRK1-208ENST00000532029 PAGE5Q96GU1 130 aa24.58■■□□□ 1.53
LRRK1-208ENST00000532029 C7orf25Q9BPX7 421 aa24.58■■□□□ 1.53
LRRK1-208ENST00000532029 PRMT7Q9NVM4 692 aaPredicted RBP24.58■■□□□ 1.53
LRRK1-208ENST00000532029 PHLPP2Q6ZVD8 1323 aa24.58■■□□□ 1.52
LRRK1-208ENST00000532029 DENND3A2RUS2 1198 aa24.57■■□□□ 1.52
LRRK1-208ENST00000532029 H0YCG3 227 aa24.57■■□□□ 1.52
LRRK1-208ENST00000532029 GOLGA6L22H0YM25 854 aa24.57■■□□□ 1.52
LRRK1-208ENST00000532029 SLC16A4O15374 487 aa24.57■■□□□ 1.52
LRRK1-208ENST00000532029 FMR1NBQ8N0W7 255 aaPredicted RBP24.57■■□□□ 1.52
LRRK1-208ENST00000532029 NTPCRQ9BSD7 190 aaKnown RBP24.57■■□□□ 1.52
LRRK1-208ENST00000532029 TMX1Q9H3N1 280 aa24.57■■□□□ 1.52
LRRK1-208ENST00000532029 PANK4Q9NVE7 773 aa24.57■■□□□ 1.52
LRRK1-208ENST00000532029 PIN4Q9Y237 131 aaKnown RBP24.57■■□□□ 1.52
LRRK1-208ENST00000532029 SLC4A7Q9Y6M7 1214 aa24.57■■□□□ 1.52
LRRK1-208ENST00000532029 ADGRA3Q8IWK6 1321 aa24.57■■□□□ 1.52
LRRK1-208ENST00000532029 TET1Q8NFU7 2136 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 K7ERI5 159 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 TRAK2O60296 914 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 AMHP03971 560 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 PRKCBP05771 671 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 WDR5P61964 334 aaKnown RBP24.56■■□□□ 1.52
LRRK1-208ENST00000532029 MAPK6Q16659 721 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 HABP4Q5JVS0 413 aaKnown RBP24.56■■□□□ 1.52
LRRK1-208ENST00000532029 KANK3Q6NY19 840 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 FAM178BQ8IXR5 827 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 GRAMD1CQ8IYS0 662 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 ENGASEQ8NFI3 743 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 BLZF1Q9H2G9 400 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 CHST12Q9NRB3 414 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 CXXC1Q9P0U4 656 aaPredicted RBP24.56■■□□□ 1.52
LRRK1-208ENST00000532029 SEL1LQ9UBV2 794 aa24.56■■□□□ 1.52
LRRK1-208ENST00000532029 A0A1W2PPC1 479 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 NCKAP1LP55160 1127 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 HERC4Q5GLZ8 1057 aaPredicted RBP24.55■■□□□ 1.52
LRRK1-208ENST00000532029 RASIP1Q5U651 963 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 CNNM4Q6P4Q7 775 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 SFR1Q86XK3 245 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 SLC17A8Q8NDX2 589 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 PRIMPOLQ96LW4 560 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 ADAM2Q99965 735 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 FZD8Q9H461 694 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 TMEM134Q9H6X4 195 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 AGPAT5Q9NUQ2 364 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 ARHGAP28Q9P2N2 729 aa24.55■■□□□ 1.52
LRRK1-208ENST00000532029 K7ENM7 598 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 ENPP3O14638 875 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 GTPBP6O43824 516 aaPredicted RBP24.54■■□□□ 1.52
LRRK1-208ENST00000532029 TSPAN1O60635 241 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 MYL1P05976 194 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 AXLP30530 894 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 SNW1Q13573 536 aaKnown RBP24.54■■□□□ 1.52
LRRK1-208ENST00000532029 CUL4BQ13620 913 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 DSC3Q14574 896 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 TMEM132AQ24JP5 1023 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 PPP4R3CPQ6ZMV5 832 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.54■■□□□ 1.52
LRRK1-208ENST00000532029 CCDC113Q9H0I3 377 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 TSPYL2Q9H2G4 693 aaPredicted RBP24.54■■□□□ 1.52
LRRK1-208ENST00000532029 RGS18Q9NS28 235 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 C1orf112Q9NSG2 853 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 DACT1Q9NYF0 836 aa24.54■■□□□ 1.52
LRRK1-208ENST00000532029 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.53■■□□□ 1.52
LRRK1-208ENST00000532029 FRMD3A2A2Y4 597 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 MGEA5O60502 916 aa24.53■■□□□ 1.52
LRRK1-208ENST00000532029 KINO60870 393 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms