RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 HLTFQ14527 1009 aaKnown RBP eCLIP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 TKFCQ3LXA3 575 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 EPC2Q52LR7 807 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 SLC17A8Q8NDX2 589 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 LPAR1Q92633 364 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 HOOK2Q96ED9 719 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 ZBED3Q96IU2 234 aaPredicted RBP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 AGPAT1Q99943 283 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 GLIS2Q9BZE0 524 aaPredicted RBP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 DDX47Q9H0S4 455 aaKnown RBP18.26■□□□□ 0.51
VPS26B-206ENST00000531741 PLEKHA4Q9H4M7 779 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 VEZTQ9HBM0 779 aa18.26■□□□□ 0.51
VPS26B-206ENST00000531741 PFASO15067 1338 aa18.25■□□□□ 0.51
VPS26B-206ENST00000531741 FOXN3O00409 490 aaPredicted RBP18.25■□□□□ 0.51
VPS26B-206ENST00000531741 WDR46O15213 610 aaKnown RBP18.25■□□□□ 0.51
VPS26B-206ENST00000531741 GTF2BQ00403 316 aa18.25■□□□□ 0.51
VPS26B-206ENST00000531741 ZFP91Q96JP5 570 aaPredicted RBP18.25■□□□□ 0.51
VPS26B-206ENST00000531741 ATP6V1G3Q96LB4 118 aa18.25■□□□□ 0.51
VPS26B-206ENST00000531741 IWS1Q96ST2 819 aa18.25■□□□□ 0.51
VPS26B-206ENST00000531741 TBC1D22BQ9NU19 505 aa18.25■□□□□ 0.51
VPS26B-206ENST00000531741 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.25■□□□□ 0.51
VPS26B-206ENST00000531741 PPP1R9AQ9ULJ8 1098 aa18.25■□□□□ 0.51
VPS26B-206ENST00000531741 EMSYQ7Z589 1322 aa18.25■□□□□ 0.51
VPS26B-206ENST00000531741 IGSF9BQ9UPX0 1349 aa18.25■□□□□ 0.51
VPS26B-206ENST00000531741 COL4A5P29400 1685 aa18.25■□□□□ 0.51
VPS26B-206ENST00000531741 INPP5BP32019 993 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 CORO7P57737 925 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 ITGB3BPQ13352 177 aaPredicted RBP18.24■□□□□ 0.51
VPS26B-206ENST00000531741 MTMR3Q13615 1198 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 MIGA2Q7L4E1 593 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 CDAN1Q8IWY9 1227 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 LARGE2Q8N3Y3 721 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 TTLL6Q8N841 843 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 TRERF1Q96PN7 1200 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 FAM107BQ9H098 131 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 FAM114A2Q9NRY5 505 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 PLAAQ9Y263 795 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 H0YGN5 161 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 DDX39AO00148 427 aaKnown RBP18.24■□□□□ 0.51
VPS26B-206ENST00000531741 NFIBO00712 420 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 ITGA4P13612 1032 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 HSD17B3P37058 310 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 C11orf63Q6NUN7 778 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 C4orf19Q8IY42 314 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 XXYLT1Q8NBI6 393 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 IL31RAQ8NI17 732 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 THAP2Q9H0W7 228 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 RASSF4Q9H2L5 321 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 TMBIM4Q9HC24 238 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 NFS1Q9Y697 457 aa18.24■□□□□ 0.51
VPS26B-206ENST00000531741 SRRM3A6NNA2 597 aaPredicted RBP18.23■□□□□ 0.51
VPS26B-206ENST00000531741 PTENP60484 403 aa18.23■□□□□ 0.51
VPS26B-206ENST00000531741 PPP3CAQ08209 521 aa18.23■□□□□ 0.51
VPS26B-206ENST00000531741 ARHGAP44Q17R89 818 aa18.23■□□□□ 0.51
VPS26B-206ENST00000531741 SPDYCQ5MJ68 293 aa18.23■□□□□ 0.51
VPS26B-206ENST00000531741 C1orf220Q5T0J3 134 aa18.23■□□□□ 0.51
VPS26B-206ENST00000531741 ZNF772Q68DY9 489 aaPredicted RBP18.23■□□□□ 0.51
VPS26B-206ENST00000531741 AEBP2Q6ZN18 517 aaPredicted RBP18.23■□□□□ 0.51
VPS26B-206ENST00000531741 BCAS4Q8TDM0 211 aa18.23■□□□□ 0.51
VPS26B-206ENST00000531741 ARHGEF26Q96DR7 871 aa18.23■□□□□ 0.51
VPS26B-206ENST00000531741 AMACRQ9UHK6 382 aa18.23■□□□□ 0.51
VPS26B-206ENST00000531741 PNMA2Q9UL42 364 aa18.23■□□□□ 0.51
VPS26B-206ENST00000531741 FGGP02679 453 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 NR1D1P20393 614 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 ABCB4P21439 1286 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 DLG4P78352 724 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 MRPS9P82933 396 aaKnown RBP18.22■□□□□ 0.51
VPS26B-206ENST00000531741 MTMR1Q13613 665 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 PTPROQ16827 1216 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 DCAF12L1Q5VU92 463 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 SH2D3CQ8N5H7 860 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 RDH13Q8NBN7 331 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 ZNF341Q9BYN7 854 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 UBE2TQ9NPD8 197 aaPredicted RBP18.22■□□□□ 0.51
VPS26B-206ENST00000531741 GINM1Q9NU53 330 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 TAS2R14Q9NYV8 317 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 HSPBP1Q9NZL4 362 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 ZBTB12Q9Y330 459 aaPredicted RBP18.22■□□□□ 0.51
VPS26B-206ENST00000531741 UTP11Q9Y3A2 253 aaKnown RBP18.22■□□□□ 0.51
VPS26B-206ENST00000531741 GOLGA6L10A6NI86 522 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 PHF20L1A8MW92 1017 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 MIF4GDA9UHW6 222 aaKnown RBP18.22■□□□□ 0.51
VPS26B-206ENST00000531741 YWHABP31946 246 aaKnown RBP18.22■□□□□ 0.51
VPS26B-206ENST00000531741 NCKAP1LP55160 1127 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 UAP1Q16222 522 aaPredicted RBP18.22■□□□□ 0.51
VPS26B-206ENST00000531741 KCTD16Q68DU8 428 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 HAUS6Q7Z4H7 955 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 SYTL5Q8TDW5 730 aaPredicted RBP18.22■□□□□ 0.51
VPS26B-206ENST00000531741 RNPC3Q96LT9 517 aaKnown RBP18.22■□□□□ 0.51
VPS26B-206ENST00000531741 CBWD1Q9BRT8 395 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 KIAA1683Q9H0B3 1180 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 RAB17Q9H0T7 212 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 SLC38A10Q9HBR0 1119 aa18.22■□□□□ 0.51
VPS26B-206ENST00000531741 GOLGA6L10A0A0M3HER8 536 aa18.21■□□□□ 0.51
VPS26B-206ENST00000531741 MTA2O94776 668 aa18.21■□□□□ 0.51
VPS26B-206ENST00000531741 CEP85LQ5SZL2 805 aa18.21■□□□□ 0.51
VPS26B-206ENST00000531741 PALB2Q86YC2 1186 aa18.21■□□□□ 0.51
VPS26B-206ENST00000531741 HVCN1Q96D96 273 aa18.21■□□□□ 0.51
VPS26B-206ENST00000531741 NEUROG2Q9H2A3 272 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms