RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 KIF18BQ86Y91 864 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 TMPRSS6Q8IU80 811 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 NOSTRINQ8IVI9 506 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 CISD2Q8N5K1 135 aaKnown RBP5.81□□□□□ -1.48
USP47-211ENST00000531513 OR2W6PQ8NHA6 318 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 CLIP3Q96DZ5 547 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 MTMR8Q96EF0 704 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 AGAP2Q99490 1192 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 ORAI3Q9BRQ5 295 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 IFT22Q9H7X7 185 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 REXO2Q9Y3B8 237 aaKnown RBP5.81□□□□□ -1.48
USP47-211ENST00000531513 SCDO00767 359 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 NEMP1O14524 444 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 SCGB1D2O95969 90 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 APPP05067 770 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 GNALP38405 381 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 SCNN1BP51168 640 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 CRHR2Q13324 411 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 GORABQ5T7V8 394 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 CCSAPQ6IQ19 270 aaPredicted RBP5.8□□□□□ -1.48
USP47-211ENST00000531513 ZCCHC8Q6NZY4 707 aaKnown RBP5.8□□□□□ -1.48
USP47-211ENST00000531513 MRGPRGQ86SM5 289 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 PASD1Q8IV76 773 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 CHPFQ8IZ52 775 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 MORC4Q8TE76 937 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 ASB15Q8WXK1 588 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 PMM1Q92871 262 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.8□□□□□ -1.48
USP47-211ENST00000531513 SLC2A4RGQ9NR83 387 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 COQ6Q9Y2Z9 468 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 SPEF1Q9Y4P9 236 aa5.8□□□□□ -1.48
USP47-211ENST00000531513 E2F8A0AVK6 867 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 PMS2P1A4D2B8 440 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 RASSF10A6NK89 507 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 CYP27B1O15528 508 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 CAND2O75155 1236 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 RHBDL3P58872 404 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 TMPRSS15P98073 1019 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 SAFB2Q14151 953 aaKnown RBP eCLIP5.79□□□□□ -1.48
USP47-211ENST00000531513 RRP1BQ14684 758 aaKnown RBP5.79□□□□□ -1.48
USP47-211ENST00000531513 MAP9Q49MG5 647 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 PIK3R6Q5UE93 754 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 ABHD17CQ6PCB6 329 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 OVCH1Q7RTY7 1134 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 DDX53Q86TM3 631 aaKnown RBP5.79□□□□□ -1.48
USP47-211ENST00000531513 DNAJC10Q8IXB1 793 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 EXOC8Q8IYI6 725 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 THEMISQ8N1K5 641 aaPredicted RBP5.79□□□□□ -1.48
USP47-211ENST00000531513 MYO1HQ8N1T3 1032 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 HIPK4Q8NE63 616 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 CHMP4CQ96CF2 233 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 SMAD5Q99717 465 aaKnown RBP5.79□□□□□ -1.48
USP47-211ENST00000531513 PARPBPQ9NWS1 579 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 ZIM2Q9NZV7 527 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 SAMD15Q9P1V8 674 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 DMRT1Q9Y5R6 373 aa5.79□□□□□ -1.48
USP47-211ENST00000531513 PRAMEF22A3QJZ6 481 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 ID4P47928 161 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 SYDE2Q5VT97 1194 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 Q6ZPA2 131 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 BCL6BQ8N143 479 aaPredicted RBP5.78□□□□□ -1.48
USP47-211ENST00000531513 CNTD1Q8N815 330 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 DLG3Q92796 817 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 ZG16BQ96DA0 208 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 HOOK2Q96ED9 719 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 GBP4Q96PP9 640 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 CAMKK2Q96RR4 588 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 CDH19Q9H159 772 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 AASDHPPTQ9NRN7 309 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 KCNH7Q9NS40 1196 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 TRHDEQ9UKU6 1024 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 APOBEC2Q9Y235 224 aaKnown RBP5.78□□□□□ -1.48
USP47-211ENST00000531513 SH3BP1Q9Y3L3 701 aa5.78□□□□□ -1.48
USP47-211ENST00000531513 CTDP1Q9Y5B0 961 aaPredicted RBP5.78□□□□□ -1.48
USP47-211ENST00000531513 A0A1W2PRX2 142 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 CBX4O00257 560 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 GABRDO14764 452 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 FOXP2O15409 715 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 F2P00734 622 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 KRT4P19013 534 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 ADAM15Q13444 863 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 PIN1Q13526 163 aaPredicted RBP5.77□□□□□ -1.49
USP47-211ENST00000531513 HLTFQ14527 1009 aaKnown RBP eCLIP5.77□□□□□ -1.49
USP47-211ENST00000531513 C14orf80Q86SX3 495 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 ZBTB46Q86UZ6 589 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 TTC8Q8TAM2 541 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 COG1Q8WTW3 980 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 MPHOSPH9Q99550 1183 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 ASB1Q9Y576 335 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 B3GALT1Q9Y5Z6 326 aa5.77□□□□□ -1.49
USP47-211ENST00000531513 TNKSO95271 1327 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 M0R2C6 588 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 MAFO75444 373 aaPredicted RBP5.76□□□□□ -1.49
USP47-211ENST00000531513 KRT18P05783 430 aaKnown RBP5.76□□□□□ -1.49
USP47-211ENST00000531513 ATF3P18847 181 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 SDHAP31040 664 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 SCNN1GP51170 649 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 SLC25A3Q00325 362 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 BIRC2Q13490 618 aa5.76□□□□□ -1.49
USP47-211ENST00000531513 UBE4AQ14139 1066 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms