RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 ZDHHC18Q9NUE0 388 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 EURLQ9NYK6 297 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 C9orf78Q9NZ63 289 aaPredicted RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 NDUFA13Q9P0J0 144 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 RABL2AQ9UBK7 228 aaPredicted RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 DBR1Q9UK59 544 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 SLIT3O75094 1523 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ADAMTSL3P82987 1691 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 MAST3O60307 1309 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 TMEM120BA0PK00 339 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 FAM196BA6NMK8 535 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 KCNK3O14649 394 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 PLSCR1O15162 318 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 MMP1P03956 469 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ZBTB48P10074 688 aaPredicted RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 CREB1P16220 341 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 PTPN4P29074 926 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 SLCO1A2P46721 670 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 EIF4A1P60842 406 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 TBL3Q12788 808 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 SLC29A2Q14542 456 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 PUS10Q3MIT2 529 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 MIIPQ5JXC2 388 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 SOGA3Q5TF21 947 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 TMEM214Q6NUQ4 689 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 IZUMO2Q6UXV1 221 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 PATL1Q86TB9 770 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 CEP70Q8NHQ1 597 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ZMAT2Q96NC0 199 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ERGIC2Q96RQ1 377 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 DUSP9Q99956 384 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ECSITQ9BQ95 431 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 CADM1Q9BY67 442 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 GBA3Q9H227 469 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 NLRC4Q9NPP4 1024 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ATAD3AQ9NVI7 634 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 SAP30BPQ9UHR5 308 aaKnown RBP8.35□□□□□ -1.07
PTPRK-219ENST00000531050 CCPG1Q9ULG6 757 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 FRMD4BQ9Y2L6 1034 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 TSC22D4Q9Y3Q8 395 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 TTLL3Q9Y4R7 772 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 ECM29Q5VYK3 1845 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 PXDNQ92626 1479 aa8.35□□□□□ -1.07
PTPRK-219ENST00000531050 RBAK-RBAKDNI3L0D1 243 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 NKRFO15226 690 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 FOXP2O15409 715 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 TIMM44O43615 452 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 GTPBP6O43824 516 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 OPHN1O60890 802 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 GH1P01241 217 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 NAT2P11245 290 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 CPA3P15088 417 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 ACADVLP49748 655 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 RASSF2P50749 326 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 DMPKQ09013 629 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 MKRN3Q13064 507 aaKnown RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 MPP2Q14168 576 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 C6orf183Q5T699 404 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 PDXDC2PQ6P474 469 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 CCDC174Q6PII3 467 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 RBM44Q6ZP01 1051 aaKnown RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 ACAD11Q709F0 780 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 CYB5R4Q7L1T6 521 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 FAM186BQ8IYM0 893 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 LRRC37BQ96QE4 947 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 PHF12Q96QT6 1004 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 TGS1Q96RS0 853 aaKnown RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 HEPHQ9BQS7 1158 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 TRIM51Q9BSJ1 452 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 BHMT2Q9H2M3 363 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 SLITRK6Q9H5Y7 841 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 SYNCQ9H7C4 482 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 NRDE2Q9H7Z3 1164 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 CHPF2Q9P2E5 772 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 MAGEC2Q9UBF1 373 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 KCNJ14Q9UNX9 436 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 RPTORQ8N122 1335 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 KDM4FA0A1W2PPD8 638 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 DYTNA2CJ06 578 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 MATN2O00339 956 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 TBC1D12O60347 775 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 STK10O94804 968 aaKnown RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 HOXB7P09629 217 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 KLRC1P26715 233 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 POU5F1Q01860 360 aaKnown RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 DSG1Q02413 1049 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 KLRC3Q07444 240 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 NR5A1Q13285 461 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 PPP2R5CQ13362 524 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 DEPDC1Q5TB30 811 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 FAAH2Q6GMR7 532 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 MFSD5Q6N075 450 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 KLHDC10Q6PID8 442 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 BTNL9Q6UXG8 535 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 TAOK1Q7L7X3 1001 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 NKX2-3Q8TAU0 364 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 PRICKLE1Q96MT3 831 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 DRC3Q9H069 523 aa8.34□□□□□ -1.07
PTPRK-219ENST00000531050 STMN4Q9H169 189 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-219ENST00000531050 LGR6Q9HBX8 967 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms