RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 GOLGA5Q8TBA6 731 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 TMEM174Q8WUU8 243 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 UBXN4Q92575 508 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 RABGGTAQ92696 567 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 SLC5A5Q92911 643 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 RPGRIP1Q96KN7 1286 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 PLIN2Q99541 437 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 EIF3CQ99613 913 aaKnown RBP6.13□□□□□ -1.43
PCF11-205ENST00000530906 TIPINQ9BVW5 301 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 MTFR1LQ9H019 292 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 METTL14Q9HCE5 456 aaKnown RBP6.13□□□□□ -1.43
PCF11-205ENST00000530906 SLC39A2Q9NP94 309 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 MYOZ2Q9NPC6 264 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 RGS17Q9UGC6 210 aaPredicted RBP6.13□□□□□ -1.43
PCF11-205ENST00000530906 PGAP2Q9UHJ9 254 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 VAV3Q9UKW4 847 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 ODF2LQ9ULJ1 636 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 PLAGL2Q9UPG8 496 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 MAPK8IP1Q9UQF2 711 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 TRAF3IP3Q9Y228 551 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 CD2APQ9Y5K6 639 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 PPP2R3BQ9Y5P8 575 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 MRFAP1Q9Y605 127 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 ATP8B3O60423 1300 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 FRMPD4Q14CM0 1322 aa6.13□□□□□ -1.43
PCF11-205ENST00000530906 IGLV3-22A0A075B6J6 115 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 SSU72P8A0A1W2PR75 194 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 GTPBP10A4D1E9 387 aaKnown RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 B4DLN1 442 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 FAM86B1E9PN63 330 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 MEIS1O00470 390 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 PES1O00541 588 aaKnown RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 WNT10BO00744 389 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 OPLAHO14841 1288 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 MSH4O15457 936 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 CALUO43852 315 aaPredicted RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 PPP1R12BO60237 982 aaPredicted RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 USO1O60763 962 aaKnown RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 LILRB5O75023 590 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 TBCAO75347 108 aaKnown RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 TADA3O75528 432 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 PSMD10O75832 226 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 URI1O94763 535 aaPredicted RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 LCA5LO95447 670 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 FAM86B2P0C5J1 330 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 SELPP16109 830 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 COL4A5P29400 1685 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 ABCD1P33897 745 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 PRELPP51888 382 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 OAZ1P54368 228 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 SNRPFP62306 86 aaKnown RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 ERVK-24P63145 666 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 FAM193AP78312 1265 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 CXCL9Q07325 125 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 DOCK1Q14185 1865 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 MYBPC2Q14324 1141 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 EPHA7Q15375 998 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 SPA17Q15506 151 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 USH1GQ495M9 461 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 HERC4Q5GLZ8 1057 aaPredicted RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 FAM83BQ5T0W9 1011 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 LRCH2Q5VUJ6 765 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 IQCEQ6IPM2 695 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 EPM2AIP1Q7L775 607 aaPredicted RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 DYMQ7RTS9 669 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 KCNK18Q7Z418 384 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 BTLAQ7Z6A9 289 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 FRMD5Q7Z6J6 570 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 CATSPER3Q86XQ3 398 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 TRIM59Q8IWR1 403 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 ALDH16A1Q8IZ83 802 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 RPTORQ8N122 1335 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 RDM1Q8NG50 284 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 NEK11Q8NG66 645 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 CPLX3Q8WVH0 158 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 GOLGA1Q92805 767 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 BHMTQ93088 406 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 NAPGQ99747 312 aaPredicted RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 HSD17B14Q9BPX1 270 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 SLF1Q9BQI6 1058 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 MKNK1Q9BUB5 465 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 WDR18Q9BV38 432 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 C2orf49Q9BVC5 232 aaPredicted RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 KCTD10Q9H3F6 313 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 AS3MTQ9HBK9 375 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 VEZTQ9HBM0 779 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 ZNF277Q9NRM2 450 aaPredicted RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 TYW1Q9NV66 732 aaKnown RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 CEP72Q9P209 647 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 CDC23Q9UJX2 597 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 FBXL5Q9UKA1 691 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 SIK3Q9Y2K2 1263 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 PCDHA2Q9Y5H9 948 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 PCDHAC2Q9Y5I4 1007 aa6.12□□□□□ -1.43
PCF11-205ENST00000530906 BZW2Q9Y6E2 419 aaKnown RBP6.12□□□□□ -1.43
PCF11-205ENST00000530906 MYPNQ86TC9 1320 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 A0A0A0MRY4 1105 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 CLRN2A0PK11 232 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 E9PMD0 336 aa6.11□□□□□ -1.43
PCF11-205ENST00000530906 TRAF5O00463 557 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms