RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 FAM228AQ86W67 206 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 DBF4BQ8NFT6 615 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 C2orf40Q9H1Z8 148 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 FZD8Q9H461 694 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 ST6GALNAC4Q9H4F1 302 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 TMEM134Q9H6X4 195 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 MINDY3Q9H8M7 445 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 ARHGAP28Q9P2N2 729 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 SEL1LQ9UBV2 794 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 ST3GAL5Q9UNP4 418 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 GINS2Q9Y248 185 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 MICAL3Q7RTP6 2002 aa17.72■□□□□ 0.43
BRK1-201ENST00000530758 GOLGA6L22H0YM25 854 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 GTPBP6O43824 516 aaPredicted RBP17.71■□□□□ 0.43
BRK1-201ENST00000530758 GAP43P17677 238 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 EFNA5P52803 228 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 SMTNP53814 917 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 NCKAP1LP55160 1127 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 CACNB1Q02641 598 aaPredicted RBP17.71■□□□□ 0.43
BRK1-201ENST00000530758 MBTD1Q05BQ5 628 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 EHHADHQ08426 723 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 DMP1Q13316 513 aaPredicted RBP17.71■□□□□ 0.43
BRK1-201ENST00000530758 LRIT3Q3SXY7 679 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 TMEM240Q5SV17 173 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 PPP4R3CPQ6ZMV5 832 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 DEFB128Q7Z7B8 93 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 SLC17A8Q8NDX2 589 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 SEPT8Q92599 483 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 ZNF668Q96K58 619 aaPredicted RBP17.71■□□□□ 0.43
BRK1-201ENST00000530758 PRIMPOLQ96LW4 560 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 PPP1R16BQ96T49 567 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 FTHL17Q9BXU8 183 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 IFIH1Q9BYX4 1025 aaKnown RBP17.71■□□□□ 0.43
BRK1-201ENST00000530758 CCDC113Q9H0I3 377 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 OLFML3Q9NRN5 406 aa17.71■□□□□ 0.43
BRK1-201ENST00000530758 PHLPP2Q6ZVD8 1323 aa17.71■□□□□ 0.42
BRK1-201ENST00000530758 ADGRA3Q8IWK6 1321 aa17.71■□□□□ 0.42
BRK1-201ENST00000530758 LRRIQ4A6NIV6 560 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 TRAK2O60296 914 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 FAM13AO94988 1023 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 FGBP02675 491 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 SFPQP23246 707 aaKnown RBP eCLIP17.7■□□□□ 0.42
BRK1-201ENST00000530758 CD52P31358 61 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 ABCD1P33897 745 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 AFMP43652 599 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 PAK2Q13177 524 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 CUL4BQ13620 913 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 AMHR2Q16671 573 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 TCTN1Q2MV58 587 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 RASIP1Q5U651 963 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 PSRC1Q6PGN9 363 aaPredicted RBP17.7■□□□□ 0.42
BRK1-201ENST00000530758 UNC13DQ70J99 1090 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 MYCT1Q8N699 235 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 TMEM161BQ8NDZ6 487 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 CCDC34Q96HJ3 373 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.7■□□□□ 0.425e-9■□□□□ 8.6
BRK1-201ENST00000530758 STRA6Q9BX79 667 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 KMT5AQ9NQR1 393 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 CHST12Q9NRB3 414 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 PANK4Q9NVE7 773 aa17.7■□□□□ 0.42
BRK1-201ENST00000530758 ABHD14A-ACY1A0A1B0GW23 586 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 H0YCG3 227 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 KLRC4O43908 158 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 EFCAB14O75071 495 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 TBCAO75347 108 aaKnown RBP17.69■□□□□ 0.42
BRK1-201ENST00000530758 BAIAP3O94812 1187 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 ACRP10323 421 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 DPYDQ12882 1025 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 IKBKEQ14164 716 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 DSC3Q14574 896 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 TPRNQ4KMQ1 711 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 C9orf50Q5SZB4 431 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 ZNF365Q70YC5 407 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 ZNF720Q7Z2F6 126 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 RTN4RL1Q86UN2 441 aaPredicted RBP17.69■□□□□ 0.42
BRK1-201ENST00000530758 ZBTB8OSQ8IWT0 167 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 CCDC65Q8IXS2 484 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 DEPTORQ8TB45 409 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 HERVK_113Q902F9 699 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 SCLT1Q96NL6 688 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 TRAIPQ9BWF2 469 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 TMX1Q9H3N1 280 aa17.69■□□□□ 0.42
BRK1-201ENST00000530758 PRMT7Q9NVM4 692 aaPredicted RBP17.69■□□□□ 0.42
BRK1-201ENST00000530758 CCDC169A6NNP5 214 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 ACKR2O00590 384 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 CSDE1O75534 798 aaKnown RBP17.68■□□□□ 0.42
BRK1-201ENST00000530758 ACTN1P12814 892 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 AXLP30530 894 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 HOXA11P31270 313 aaPredicted RBP17.68■□□□□ 0.42
BRK1-201ENST00000530758 TTC3P53804 2025 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 GTF2BQ00403 316 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 NFX1Q12986 1120 aaKnown RBP17.68■□□□□ 0.42
BRK1-201ENST00000530758 TAS1R3Q7RTX0 852 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 HAUS6Q7Z4H7 955 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 GRAMD1CQ8IYS0 662 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 SPATA20Q8TB22 786 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 BLZF1Q9H2G9 400 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 RGS18Q9NS28 235 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 AGPAT5Q9NUQ2 364 aa17.68■□□□□ 0.42
BRK1-201ENST00000530758 DACT1Q9NYF0 836 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms