RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 EPC2Q52LR7 807 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 SWSAP1Q6NVH7 229 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 SPRED2Q7Z698 418 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 FAM178BQ8IXR5 827 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 CKAP2LQ8IYA6 745 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 SPATA20Q8TB22 786 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 CCDC34Q96HJ3 373 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 NACC1Q96RE7 527 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 CDY2AQ9Y6F7 541 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 COL4A6Q14031 1691 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 COL1A2P08123 1366 aa17.29■□□□□ 0.36
CTSB-219ENST00000530640 DKC1O60832 514 aaKnown RBP eCLIP17.28■□□□□ 0.364e-14■■■■■ 34
CTSB-219ENST00000530640 PLA2G4BP0C869 781 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 PNOCQ13519 176 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 MCM6Q14566 821 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 IER5Q5VY09 327 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 CNNM4Q6P4Q7 775 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 MTHFD1LQ6UB35 978 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 GJD3Q8N144 294 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 SYT2Q8N9I0 419 aaPredicted RBP17.28■□□□□ 0.36
CTSB-219ENST00000530640 C17orf80Q9BSJ5 609 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 TRIM9Q9C026 710 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 HOOK1Q9UJC3 728 aaKnown RBP17.28■□□□□ 0.36
CTSB-219ENST00000530640 DBR1Q9UK59 544 aaKnown RBP17.28■□□□□ 0.36
CTSB-219ENST00000530640 DNM3Q9UQ16 869 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 PCDHA2Q9Y5H9 948 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 XRCC6P12956 609 aaKnown RBP eCLIP17.28■□□□□ 0.368e-11■■□□□ 11.5
CTSB-219ENST00000530640 ATP4AP20648 1035 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 KCNA5P22460 613 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 YWHABP31946 246 aaKnown RBP17.28■□□□□ 0.36
CTSB-219ENST00000530640 AFMP43652 599 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 RARRES1P49788 294 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 DPYDQ12882 1025 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 GPM6BQ13491 265 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 LPIN1Q14693 890 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 FBXO47Q5MNV8 452 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 NT5DC1Q5TFE4 455 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 TSHZ1Q6ZSZ6 1077 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 ANO5Q75V66 913 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 SV2BQ7L1I2 683 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 TMEM192Q8IY95 271 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 PIGOQ8TEQ8 1089 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 LMAN2LQ9H0V9 348 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 BHMT2Q9H2M3 363 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 PRKAG3Q9UGI9 489 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 TRPV2Q9Y5S1 764 aa17.28■□□□□ 0.36
CTSB-219ENST00000530640 SMIM35A0A1B0GVV1 85 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 GRXCR2A6NFK2 248 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 MYMKA6NI61 221 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 C5orf67F2Z3F1 127 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 ZBTB39O15060 712 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 OATP04181 439 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 CYP11B2P19099 503 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 TMEM62Q0P6H9 643 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 COL19A1Q14993 1142 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 ZNF484Q5JVG2 852 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 PTCRAQ6ISU1 281 aaPredicted RBP17.27■□□□□ 0.35
CTSB-219ENST00000530640 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.27■□□□□ 0.35
CTSB-219ENST00000530640 BBXQ8WY36 941 aaPredicted RBP17.27■□□□□ 0.35
CTSB-219ENST00000530640 STAMQ92783 540 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 PABPC5Q96DU9 382 aaKnown RBP17.27■□□□□ 0.35
CTSB-219ENST00000530640 C7orf25Q9BPX7 421 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 NSUN3Q9H649 340 aaKnown RBP17.27■□□□□ 0.35
CTSB-219ENST00000530640 ANKEF1Q9NU02 776 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 KIAA1468Q9P260 1216 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 RAPGEFL1Q9UHV5 662 aa17.27■□□□□ 0.35
CTSB-219ENST00000530640 A0A087WWV3 80 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.26■□□□□ 0.35
CTSB-219ENST00000530640 SYCE3A1L190 88 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 TMEM150BA6NC51 233 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 PRR33A8MZF0 331 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 UPP2O95045 317 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 LETM1O95202 739 aaPredicted RBP17.26■□□□□ 0.35
CTSB-219ENST00000530640 KLRC1P26715 233 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 CASP1P29466 404 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 SARSP49591 514 aaKnown RBP17.26■□□□□ 0.35
CTSB-219ENST00000530640 CUL4BQ13620 913 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 XKR3Q5GH77 459 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 TRMT1LQ7Z2T5 733 aaKnown RBP17.26■□□□□ 0.35
CTSB-219ENST00000530640 FIBCD1Q8N539 461 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 ERCC4Q92889 916 aaPredicted RBP17.26■□□□□ 0.35
CTSB-219ENST00000530640 FAM167AQ96KS9 214 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 FUCA2Q9BTY2 467 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 KCND2Q9NZV8 630 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 SQORQ9Y6N5 450 aa17.26■□□□□ 0.35
CTSB-219ENST00000530640 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
CTSB-219ENST00000530640 ZNF445P59923 1031 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 AMPD3Q01432 767 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 ARSHQ5FYA8 562 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 PLA2G4FQ68DD2 849 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 GPBP1Q86WP2 473 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 NME8Q8N427 588 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 DNAJC19Q96DA6 116 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 C11orf84Q9BUA3 381 aaPredicted RBP17.25■□□□□ 0.35
CTSB-219ENST00000530640 RUSC1Q9BVN2 902 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 LRRC27Q9C0I9 530 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 GZF1Q9H116 711 aaPredicted RBP17.25■□□□□ 0.35
CTSB-219ENST00000530640 BLZF1Q9H2G9 400 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 PCDHA5Q9Y5H7 936 aa17.25■□□□□ 0.35
CTSB-219ENST00000530640 ARHGEF35A5YM69 484 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms