RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 GRID2IPA4D2P6 1211 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 MIF4GDA9UHW6 222 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 XPO1O14980 1071 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 USP17L8P0C7I0 530 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 POU5F1BQ06416 359 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 KCNA1Q09470 495 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 NR1H3Q13133 447 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 EFTUD2Q15029 972 aaKnown RBP eCLIP8.12□□□□□ -1.113e-8■■■■■ 29.5
CTNND1-223ENST00000529986 RSRC2Q7L4I2 434 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 NOA1Q8NC60 698 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 FLAD1Q8NFF5 587 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 RNPC3Q96LT9 517 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 HEXIM2Q96MH2 286 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 CPVLQ9H3G5 476 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 USP15Q9Y4E8 981 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 MED14O60244 1454 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 CHEK2O96017 543 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 ATP2B4P23634 1241 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 COPB2P35606 906 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 CTCFP49711 727 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 KLHL38Q2WGJ6 581 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 ZNF772Q68DY9 489 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 KLC3Q6P597 504 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 TRPM8Q7Z2W7 1104 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 STAG2Q8N3U4 1231 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 ZNF564Q8TBZ8 553 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 DTNBP1Q96EV8 351 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 ZIM3Q96PE6 472 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 C11orf70Q9BRQ4 267 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 KLC2Q9H0B6 622 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 TMEM206Q9H813 350 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 NOD2Q9HC29 1040 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 SFMBT1Q9UHJ3 866 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 SNX12Q9UMY4 172 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 GNL1P36915 607 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 PLA2G4AP47712 749 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 SF3B3Q15393 1217 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 IZUMO3Q5VZ72 239 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 SHC4Q6S5L8 630 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 C4orf33Q8N1A6 199 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 MDM1Q8TC05 714 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 XPO6Q96QU8 1125 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 NACC1Q96RE7 527 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 PCSK1NQ9UHG2 260 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 WBP4O75554 376 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 FOSP01100 380 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 ATP6V1B1P15313 513 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 CCND1P24385 295 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 PMLP29590 882 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 HOXA13P31271 388 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 HDAC4P56524 1084 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 DLGAP5Q15398 846 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 FAM47CQ5HY64 1035 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 LRRC31Q6UY01 552 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 LARGE2Q8N3Y3 721 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 TBC1D22AQ8WUA7 517 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 TFR2Q9UP52 801 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 A2ML1A8K2U0 1454 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 SYNDIG1LA6NDD5 238 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 GOLGA8CPA6NN73 597 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 KIF28PB7ZC32 967 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 KRT75O95678 551 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 FTLP02792 175 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 KRT4P19013 534 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 VCAM1P19320 739 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 CHRNA3P32297 505 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 KRT17Q04695 432 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 ZC3H12BQ5HYM0 836 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 BZW1Q7L1Q6 419 aaKnown RBP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 DDX42Q86XP3 938 aaKnown RBP eCLIP8.12□□□□□ -1.11
CTNND1-223ENST00000529986 GLYCTKQ8IVS8 523 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 THTPAQ9BU02 230 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 SNX25Q9H3E2 840 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 TRABDQ9H4I3 376 aa8.12□□□□□ -1.11
CTNND1-223ENST00000529986 CPA2P48052 419 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 AP1B1Q10567 949 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 SPOUT1Q5T280 376 aaKnown RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 UNC13DQ70J99 1090 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 SFR1Q86XK3 245 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 RNF135Q8IUD6 432 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 SPDYE1Q8NFV5 336 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 TEKT4Q8WW24 435 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 SNF8Q96H20 258 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 RBM12Q9NTZ6 932 aaKnown RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 HACD3Q9P035 362 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 TSR3Q9UJK0 312 aaKnown RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 TRIM33Q9UPN9 1127 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 SATB2Q9UPW6 733 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 BCS1LQ9Y276 419 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 E9PMD0 336 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 NEMP1O14524 444 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 PCCAP05165 728 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 KRT8P05787 483 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 TAC1P20366 129 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 HADHAP40939 763 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 RPS6P62753 249 aaKnown RBP8.11□□□□□ -1.11
CTNND1-223ENST00000529986 MTERF2Q49AM1 385 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 CYB5R4Q7L1T6 521 aa8.11□□□□□ -1.11
CTNND1-223ENST00000529986 ZNF507Q8TCN5 953 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms