RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 XKR3Q5GH77 459 aa18.08■□□□□ 0.48
COL16A1-216ENST00000529928 ERMP1Q7Z2K6 904 aa18.08■□□□□ 0.48
COL16A1-216ENST00000529928 RASEFQ8IZ41 740 aa18.08■□□□□ 0.48
COL16A1-216ENST00000529928 BCL7CQ8WUZ0 217 aaPredicted RBP18.08■□□□□ 0.48
COL16A1-216ENST00000529928 SLC5A5Q92911 643 aa18.08■□□□□ 0.48
COL16A1-216ENST00000529928 FDXACB1Q9BRP7 624 aaPredicted RBP18.08■□□□□ 0.48
COL16A1-216ENST00000529928 EMILIN2Q9BXX0 1053 aa18.08■□□□□ 0.48
COL16A1-216ENST00000529928 NIFKQ9BYG3 293 aaKnown RBP18.08■□□□□ 0.48
COL16A1-216ENST00000529928 UNC45AQ9H3U1 944 aa18.08■□□□□ 0.48
COL16A1-216ENST00000529928 INPP5FQ9Y2H2 1132 aa18.08■□□□□ 0.48
COL16A1-216ENST00000529928 IGKV6-21A0A0C4DH24 114 aa18.07■□□□□ 0.48
COL16A1-216ENST00000529928 ZNF623O75123 536 aa18.07■□□□□ 0.48
COL16A1-216ENST00000529928 AKAP17AQ02040 695 aaKnown RBP18.07■□□□□ 0.48
COL16A1-216ENST00000529928 LONRF3Q496Y0 759 aa18.07■□□□□ 0.48
COL16A1-216ENST00000529928 C15orf39Q6ZRI6 1047 aa18.07■□□□□ 0.48
COL16A1-216ENST00000529928 CCDC105Q8IYK2 499 aa18.07■□□□□ 0.48
COL16A1-216ENST00000529928 PGBD4Q96DM1 585 aa18.07■□□□□ 0.48
COL16A1-216ENST00000529928 RTP3Q9BQQ7 232 aa18.07■□□□□ 0.48
COL16A1-216ENST00000529928 GBP3Q9H0R5 595 aa18.07■□□□□ 0.48
COL16A1-216ENST00000529928 DNAJB4Q9UDY4 337 aa18.07■□□□□ 0.48
COL16A1-216ENST00000529928 DUSP12Q9UNI6 340 aa18.07■□□□□ 0.48
COL16A1-216ENST00000529928 NID2Q14112 1375 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 OFD1O75665 1012 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 KLRC2P26717 231 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 SLC11A1P49279 550 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 CLCN4P51793 760 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 CATSPER4Q7RTX7 472 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 MIER3Q7Z3K6 550 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 RHPN2Q8IUC4 686 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 ADSSL1Q8N142 457 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 URGCPQ8TCY9 931 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 KLHL5Q96PQ7 755 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 CEP89Q96ST8 783 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 VN1R3Q9BXE9 311 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 KCNK12Q9HB15 430 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 IGSF9Q9P2J2 1179 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 FBXL21Q9UKT6 434 aa18.06■□□□□ 0.48
COL16A1-216ENST00000529928 MEIS3P2A8K0S8 358 aa18.05■□□□□ 0.48
COL16A1-216ENST00000529928 EDIL3O43854 480 aa18.05■□□□□ 0.48
COL16A1-216ENST00000529928 MAFO75444 373 aaPredicted RBP18.05■□□□□ 0.48
COL16A1-216ENST00000529928 PSMD10O75832 226 aa18.05■□□□□ 0.48
COL16A1-216ENST00000529928 NPR3P17342 541 aa18.05■□□□□ 0.48
COL16A1-216ENST00000529928 ANGPT1Q15389 498 aa18.05■□□□□ 0.48
COL16A1-216ENST00000529928 LETM2Q2VYF4 491 aa18.05■□□□□ 0.48
COL16A1-216ENST00000529928 BMP2KLQ5H9B9 411 aa18.05■□□□□ 0.48
COL16A1-216ENST00000529928 PHKBQ93100 1093 aa18.05■□□□□ 0.48
COL16A1-216ENST00000529928 RNF26Q9BY78 433 aaPredicted RBP18.05■□□□□ 0.48
COL16A1-216ENST00000529928 SUCLA2Q9P2R7 463 aaPredicted RBP18.05■□□□□ 0.48
COL16A1-216ENST00000529928 RIF1Q5UIP0 2472 aaKnown RBP18.05■□□□□ 0.48
COL16A1-216ENST00000529928 FAM186AA6NE01 2351 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 PI15O43692 258 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 CNPP09543 421 aaKnown RBP18.04■□□□□ 0.48
COL16A1-216ENST00000529928 ID4P47928 161 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 Q4G0T1 1027 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 Q6ZUG5 572 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 ZNF280BQ86YH2 543 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 SIX5Q8N196 739 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 FEZF2Q8TBJ5 459 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 BRF1Q92994 677 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 NLRP4Q96MN2 994 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 JPH2Q9BR39 696 aaPredicted RBP18.04■□□□□ 0.48
COL16A1-216ENST00000529928 C22orf23Q9BZE7 217 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 MRPL17Q9NRX2 175 aaKnown RBP18.04■□□□□ 0.48
COL16A1-216ENST00000529928 AGPAT5Q9NUQ2 364 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 KANSL3Q9P2N6 904 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 PCDHB2Q9Y5E7 798 aa18.04■□□□□ 0.48
COL16A1-216ENST00000529928 TMEM150BA6NC51 233 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 B4GALT3O60512 393 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 STBD1O95210 358 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 ALDH2P05091 517 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 SSBP05455 408 aaKnown RBP eCLIP18.03■□□□□ 0.48
COL16A1-216ENST00000529928 ELMSAN1Q6PJG2 1045 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 DTWD2Q8NBA8 298 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 CMASQ8NFW8 434 aaPredicted RBP18.03■□□□□ 0.48
COL16A1-216ENST00000529928 TBCKQ8TEA7 893 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 GJA10Q969M2 543 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 FAM193BQ96PV7 902 aaPredicted RBP18.03■□□□□ 0.48
COL16A1-216ENST00000529928 SH2D3AQ9BRG2 576 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 TMEM175Q9BSA9 504 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 SH3GLB2Q9NR46 395 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 VPS54Q9P1Q0 977 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 DPP7Q9UHL4 492 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 FAN1Q9Y2M0 1017 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 SPTBN4Q9H254 2564 aa18.03■□□□□ 0.48
COL16A1-216ENST00000529928 CNTNAP2Q9UHC6 1331 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 DDX11L8A8MPP1 907 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 LILRB3O75022 631 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 NONOQ15233 471 aaKnown RBP eCLIP18.02■□□□□ 0.48
COL16A1-216ENST00000529928 NTRK3Q16288 839 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 B3GNT9Q6UX72 402 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 CYP26C1Q6V0L0 522 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 AGMOQ6ZNB7 445 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 CENPQQ7L2Z9 268 aaPredicted RBP18.02■□□□□ 0.48
COL16A1-216ENST00000529928 SKAP1Q86WV1 359 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 KSR1Q8IVT5 923 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 STAMQ92783 540 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 SLC26A6Q9BXS9 759 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 RSAD1Q9HA92 442 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 IFT122Q9HBG6 1241 aa18.02■□□□□ 0.48
COL16A1-216ENST00000529928 WNT16Q9UBV4 365 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms