RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 A0A0A6YYJ9 748 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 A0A1W2PRX2 142 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 C2orf78A6NCI8 922 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 MUSKO15146 869 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 KDM1AO60341 852 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 KATNA1O75449 491 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 ALDH1L1O75891 902 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 HNRNPLP14866 589 aaKnown RBP eCLIP6.2□□□□□ -1.42
C11orf88-204ENST00000529661 COMTP21964 271 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 BPIFB4P59827 614 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 PHC1P78364 1004 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 DUSP8Q13202 625 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 MTMR1Q13613 665 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 RIN1Q13671 783 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 ODR4Q5SWX8 454 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 GPR158Q5T848 1215 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 BROXQ5VW32 411 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 POLNQ7Z5Q5 900 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 CLEC14AQ86T13 490 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 ANKRD53Q8N9V6 530 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 SH3RF3Q8TEJ3 882 aaPredicted RBP6.2□□□□□ -1.42
C11orf88-204ENST00000529661 SLC5A5Q92911 643 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 ASPSCR1Q9BZE9 553 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 TRIM8Q9BZR9 551 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 PITHD1Q9GZP4 211 aaPredicted RBP6.2□□□□□ -1.42
C11orf88-204ENST00000529661 SLC6A15Q9H2J7 730 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 TSC22D4Q9Y3Q8 395 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 SLC30A1Q9Y6M5 507 aa6.2□□□□□ -1.42
C11orf88-204ENST00000529661 DAPK3O43293 454 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 ACO1P21399 889 aaKnown RBP6.19□□□□□ -1.42
C11orf88-204ENST00000529661 MSX2P35548 267 aaPredicted RBP6.19□□□□□ -1.42
C11orf88-204ENST00000529661 ADCY7P51828 1080 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 SAFB2Q14151 953 aaKnown RBP eCLIP6.19□□□□□ -1.42
C11orf88-204ENST00000529661 GRM7Q14831 915 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 CDSNQ15517 529 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 ZBTB41Q5SVQ8 909 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 KRT40Q6A162 431 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 PLA2G15Q8NCC3 412 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 JDP2Q8WYK2 163 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 HIST1H2AHQ96KK5 128 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 HIST1H2AJQ99878 128 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 ANO3Q9BYT9 981 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 HAPLN2Q9GZV7 340 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 NELFAQ9H3P2 528 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 AGO3Q9H9G7 860 aaKnown RBP6.19□□□□□ -1.42
C11orf88-204ENST00000529661 PLA2G3Q9NZ20 509 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 CHPF2Q9P2E5 772 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 USP18Q9UMW8 372 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 APOBEC2Q9Y235 224 aaKnown RBP6.19□□□□□ -1.42
C11orf88-204ENST00000529661 NOC2LQ9Y3T9 749 aaKnown RBP6.19□□□□□ -1.42
C11orf88-204ENST00000529661 MYPNQ86TC9 1320 aa6.19□□□□□ -1.42
C11orf88-204ENST00000529661 TOX4O94842 621 aa6.18□□□□□ -1.42
C11orf88-204ENST00000529661 FOXL1Q12952 345 aa6.18□□□□□ -1.42
C11orf88-204ENST00000529661 PRKD1Q15139 912 aaPredicted RBP6.18□□□□□ -1.42
C11orf88-204ENST00000529661 TTF1Q15361 905 aaPredicted RBP6.18□□□□□ -1.42
C11orf88-204ENST00000529661 SPDYAQ5MJ70 313 aa6.18□□□□□ -1.42
C11orf88-204ENST00000529661 FRMD7Q6ZUT3 714 aa6.18□□□□□ -1.42
C11orf88-204ENST00000529661 HDGFL2Q7Z4V5 671 aaPredicted RBP6.18□□□□□ -1.42
C11orf88-204ENST00000529661 SPRED1Q7Z699 444 aa6.18□□□□□ -1.42
C11orf88-204ENST00000529661 CXorf67Q86X51 503 aaPredicted RBP6.18□□□□□ -1.42
C11orf88-204ENST00000529661 CCDC8Q9H0W5 538 aaPredicted RBP6.18□□□□□ -1.42
C11orf88-204ENST00000529661 MSL2Q9HCI7 577 aa6.18□□□□□ -1.42
C11orf88-204ENST00000529661 MYRFQ9Y2G1 1151 aa6.18□□□□□ -1.42
C11orf88-204ENST00000529661 PCDHB6Q9Y5E3 794 aa6.18□□□□□ -1.42
C11orf88-204ENST00000529661 EID1Q9Y6B2 187 aa6.18□□□□□ -1.42
C11orf88-204ENST00000529661 A0A0A6YYK5 440 aaPredicted RBP6.17□□□□□ -1.42
C11orf88-204ENST00000529661 PRSS38A1L453 326 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 C1QTNF3-AMACRE9PGA6 284 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 K7ESF4 209 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 CLEC2LP0C7M8 214 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 EPHB1P54762 984 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 TMPRSS15P98073 1019 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 ITKQ08881 620 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 FAPQ12884 760 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 R3HDM1Q15032 1099 aaKnown RBP6.17□□□□□ -1.42
C11orf88-204ENST00000529661 CCDC62Q6P9F0 684 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 D2HGDHQ8N465 521 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 CDYL2Q8N8U2 506 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 RABGGTAQ92696 567 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 FAM89AQ96GI7 184 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 GPHA2Q96T91 129 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 SOX7Q9BT81 388 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 MENTQ9BUN1 341 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 NCDNQ9UBB6 729 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 RCAN3Q9UKA8 241 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 PPP2R3BQ9Y5P8 575 aa6.17□□□□□ -1.42
C11orf88-204ENST00000529661 PMS2P1A4D2B8 440 aa6.16□□□□□ -1.42
C11orf88-204ENST00000529661 FSBPO95073 299 aa6.16□□□□□ -1.42
C11orf88-204ENST00000529661 PFKMP08237 780 aa6.16□□□□□ -1.42
C11orf88-204ENST00000529661 HHEXQ03014 270 aa6.16□□□□□ -1.42
C11orf88-204ENST00000529661 NFE2Q16621 373 aaPredicted RBP6.16□□□□□ -1.42
C11orf88-204ENST00000529661 MAN2A1Q16706 1144 aa6.16□□□□□ -1.42
C11orf88-204ENST00000529661 CCDC181Q5TID7 509 aa6.16□□□□□ -1.42
C11orf88-204ENST00000529661 SYDE2Q5VT97 1194 aa6.16□□□□□ -1.42
C11orf88-204ENST00000529661 GAREM2Q75VX8 874 aa6.16□□□□□ -1.42
C11orf88-204ENST00000529661 RAVER1Q8IY67 606 aaKnown RBP6.16□□□□□ -1.42
C11orf88-204ENST00000529661 ZNF808Q8N4W9 903 aaPredicted RBP6.16□□□□□ -1.42
C11orf88-204ENST00000529661 CNTD1Q8N815 330 aa6.16□□□□□ -1.42
C11orf88-204ENST00000529661 COG1Q8WTW3 980 aa6.16□□□□□ -1.42
C11orf88-204ENST00000529661 UIMC1Q96RL1 719 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms