RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 APEX2Q9UBZ4 518 aa16.08■□□□□ 0.16
ECHDC1-220ENST00000528402 SEPT9Q9UHD8 586 aaPredicted RBP16.08■□□□□ 0.16
ECHDC1-220ENST00000528402 SYNGAP1Q96PV0 1343 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 MACROD2A1Z1Q3 448 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 DENND3A2RUS2 1198 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 OATP04181 439 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 MCM3P25205 808 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 CNGA1P29973 690 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 SOX5P35711 763 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 ITIH3Q06033 890 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 SNAPC2Q13487 334 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 BRD3Q15059 726 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 TEX35Q5T0J7 233 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 LDLRAD1Q5T700 205 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 CYFIP1Q7L576 1253 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 LRRN4CLQ8ND94 238 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 SEPT1Q8WYJ6 367 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 FAM167AQ96KS9 214 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 CALR3Q96L12 384 aaKnown RBP16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 FAM81BQ96LP2 452 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 INTS2Q9H0H0 1204 aaKnown RBP16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 DNAJC12Q9UKB3 198 aa16.07■□□□□ 0.16
ECHDC1-220ENST00000528402 SOWAHBA6NEL2 793 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 CNMDO75829 334 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 SP2Q02086 613 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 PTK2Q05397 1052 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 KCTD2Q14681 263 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 FBXO38Q6PIJ6 1188 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 TMCO3Q6UWJ1 677 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 METTL7BQ6UX53 244 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 SEPT14Q6ZU15 432 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 UBE2Q2Q8WVN8 375 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 LMBR1Q8WVP7 490 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 OPTNQ96CV9 577 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 FBXL18Q96ME1 805 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 GPRC5CQ9NQ84 441 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 ADAMTS1Q9UHI8 967 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 SLC45A1Q9Y2W3 748 aa16.06■□□□□ 0.16
ECHDC1-220ENST00000528402 MYH10P35580 1976 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 A0A087X0T9 212 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 GAS2O43903 313 aaKnown RBP16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 ATP1A1P05023 1023 aaKnown RBP16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 FAM228BP0C875 321 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 NAMPTP43490 491 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 POLGP54098 1239 aaPredicted RBP16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 CBWD6Q4V339 395 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 CBWD3Q5JTY5 395 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 CBWD5Q5RIA9 395 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 SLFN12LQ6IEE8 588 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 ZNF571Q7Z3V5 609 aaPredicted RBP16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 RDH13Q8NBN7 331 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 MSANTD4Q8NCY6 345 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 MORC4Q8TE76 937 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 SLC7A3Q8WY07 619 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 MFSD14AQ96MC6 490 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 CBWD1Q9BRT8 395 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 PAGR1Q9BTK6 254 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 PCIF1Q9H4Z3 704 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 TAF1DQ9H5J8 278 aaPredicted RBP16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 DHX33Q9H6R0 707 aaKnown RBP16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 OGFRQ9NZT2 677 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 ARHGAP28Q9P2N2 729 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 RBPJLQ9UBG7 517 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 SNX12Q9UMY4 172 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 DUSP10Q9Y6W6 482 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 EMSYQ7Z589 1322 aa16.05■□□□□ 0.16
ECHDC1-220ENST00000528402 DOCK5Q9H7D0 1870 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 A0A0A6YYK5 440 aaPredicted RBP16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 TMEM150BA6NC51 233 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 F8VZ95 297 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 FARP2O94887 1054 aaPredicted RBP16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 UBA1P22314 1058 aaKnown RBP16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 STAT5BP51692 787 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 NAP1L1P55209 391 aaKnown RBP16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 ARID5AQ03989 594 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 STRN3Q13033 797 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 MOGSQ13724 837 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 DRAP1Q14919 205 aaPredicted RBP16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 EMC2Q15006 297 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 KIAA0753Q2KHM9 967 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 EPC2Q52LR7 807 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 ALKBH5Q6P6C2 394 aaKnown RBP16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 LMO3Q8TAP4 145 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 SLC10A4Q96EP9 437 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 CLMNQ96JQ2 1002 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 MMP19Q99542 508 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 POLR3FQ9H1D9 316 aaPredicted RBP16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 PORCNQ9H237 461 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 IKZF4Q9H2S9 585 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 XPNPEP1Q9NQW7 623 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 PUF60Q9UHX1 559 aaKnown RBP16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 NAGPAQ9UK23 515 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 HYOU1Q9Y4L1 999 aa16.04■□□□□ 0.16
ECHDC1-220ENST00000528402 DNAJC25-GNG10A0A024R161 153 aa16.03■□□□□ 0.16
ECHDC1-220ENST00000528402 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
ECHDC1-220ENST00000528402 CCDC151A5D8V7 595 aa16.03■□□□□ 0.16
ECHDC1-220ENST00000528402 ASB14A6NK59 587 aa16.03■□□□□ 0.16
ECHDC1-220ENST00000528402 ERLIN1O75477 346 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms