RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 IL17AQ16552 155 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 TJAP1Q5JTD0 557 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 KRT79Q5XKE5 535 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 POTEGQ6S5H5 508 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 PADI6Q6TGC4 694 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 KCTD17Q8N5Z5 321 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 SPPL3Q8TCT6 385 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 HLA-CQ95604 372 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 NSUN3Q9H649 340 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 CWH43Q9H720 699 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 FAM105AQ9NUU6 356 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 TYW1Q9NV66 732 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 PLXNA4Q9HCM2 1894 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 K7ELQ4 463 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 NCK2O43639 380 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 ABCB7O75027 752 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 ERLIN2O94905 339 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 BMP15O95972 392 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 ITGB1P05556 798 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 ATF7P17544 494 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 LAG3P18627 525 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 UBE3AQ05086 875 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 CAPSQ13938 189 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 ECM1Q16610 540 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 CLLU1OSQ5K130 101 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 SPOUT1Q5T280 376 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 MRPL10Q7Z7H8 261 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 LRRC43Q8N309 656 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 KLHL23Q8NBE8 558 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 CNNM3Q8NE01 707 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 ASAP3Q8TDY4 903 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 SNX29Q8TEQ0 813 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 SNX21Q969T3 373 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 PGBD4Q96DM1 585 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 CCDC51Q96ER9 411 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 MRPL9Q9BYD2 267 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 POLR3FQ9H1D9 316 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 DAXXQ9UER7 740 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 KIAA1024Q9UPX6 916 aa13.44□□□□□ -0.26
TRAPPC4-209ENST00000528230 CARNS1A5YM72 827 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 INO80B-WBP1J3KQ70 363 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 MBTD1Q05BQ5 628 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 CAMK1Q14012 370 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 LRRC55Q6ZSA7 311 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 COLGALT1Q8NBJ5 622 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 RNF169Q8NCN4 708 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 COL25A1Q9BXS0 654 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 BHMT2Q9H2M3 363 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 ALG13Q9NP73 1137 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 DDX19AQ9NUU7 478 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 DNM3Q9UQ16 869 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 PCDHB2Q9Y5E7 798 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 MYO7AQ13402 2215 aa13.43□□□□□ -0.26
TRAPPC4-209ENST00000528230 EYSQ5T1H1 3165 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 SLC26A4O43511 780 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 TSPAN1O60635 241 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 EYA4O95677 639 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 COL19A1Q14993 1142 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 PPP2R5AQ15172 486 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 TCEAL5Q5H9L2 206 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 HYIQ5T013 277 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 UBXN11Q5T124 520 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 PDE12Q6L8Q7 609 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 NOTUMQ6P988 496 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 KCNT2Q6UVM3 1135 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 GLB1LQ6UWU2 654 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 MAEAQ7L5Y9 396 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 HELQQ8TDG4 1101 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 POF1BQ8WVV4 589 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 PRIMPOLQ96LW4 560 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 AK8Q96MA6 479 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 MMTAG2Q9BU76 263 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 NT5C3AQ9H0P0 336 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 C2orf40Q9H1Z8 148 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 UBN1Q9NPG3 1134 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 GPRC5CQ9NQ84 441 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 LZTS1Q9Y250 596 aa13.42□□□□□ -0.26
TRAPPC4-209ENST00000528230 CNTNAP2Q9UHC6 1331 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 VWA3AA6NCI4 1184 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 LRRIQ4A6NIV6 560 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 PP2D1A8MPX8 630 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 OFD1O75665 1012 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 FGF18O76093 207 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 BMP1P13497 986 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 ARF4P18085 180 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 NCLP19338 710 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 SYT1P21579 422 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 PPM1AP35813 382 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 NAMPTP43490 491 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 AMHR2Q16671 573 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 FAM187BQ17R55 369 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 CDCA2Q69YH5 1023 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 AGMOQ6ZNB7 445 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 ZBTB8OSQ8IWT0 167 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 THNSL1Q8IYQ7 743 aa13.41□□□□□ -0.26
TRAPPC4-209ENST00000528230 KIFAP3Q92845 792 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms