RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ZNF598Q86UK7 904 aaKnown RBP17.27■□□□□ 0.36
CAPN1-213ENST00000527897 LRRC43Q8N309 656 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 C4orf32Q8N8J7 132 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 MICAL1Q8TDZ2 1067 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 NACC1Q96RE7 527 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 CWH43Q9H720 699 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 GPRC5CQ9NQ84 441 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 AGPAT5Q9NUQ2 364 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 FAM105AQ9NUU6 356 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 CLDND1Q9NY35 253 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 LRWD1Q9UFC0 647 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 INPP5FQ9Y2H2 1132 aa17.27■□□□□ 0.36
CAPN1-213ENST00000527897 ARHGEF35A5YM69 484 aa17.26■□□□□ 0.35
CAPN1-213ENST00000527897 H3BQ06 376 aaPredicted RBP17.26■□□□□ 0.35
CAPN1-213ENST00000527897 FGF18O76093 207 aa17.26■□□□□ 0.35
CAPN1-213ENST00000527897 SKIP12755 728 aa17.26■□□□□ 0.35
CAPN1-213ENST00000527897 BMP1P13497 986 aa17.26■□□□□ 0.35
CAPN1-213ENST00000527897 RPA1P27694 616 aa17.26■□□□□ 0.35
CAPN1-213ENST00000527897 IRS1P35568 1242 aa17.26■□□□□ 0.35
CAPN1-213ENST00000527897 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.358e-7■■□□□ 13.8
CAPN1-213ENST00000527897 CAPSQ13938 189 aa17.26■□□□□ 0.35
CAPN1-213ENST00000527897 LARP1BQ659C4 914 aaKnown RBP17.26■□□□□ 0.35
CAPN1-213ENST00000527897 SNX29Q8TEQ0 813 aa17.26■□□□□ 0.35
CAPN1-213ENST00000527897 BACH2Q9BYV9 841 aa17.26■□□□□ 0.35
CAPN1-213ENST00000527897 PCDHGC5Q9Y5F6 944 aa17.26■□□□□ 0.35
CAPN1-213ENST00000527897 LRRIQ4A6NIV6 560 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 MEIS3P2A8K0S8 358 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 XRCC6P12956 609 aaKnown RBP eCLIP17.25■□□□□ 0.35
CAPN1-213ENST00000527897 GLRA2P23416 452 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 GTF2F1P35269 517 aaKnown RBP eCLIP17.25■□□□□ 0.35
CAPN1-213ENST00000527897 ARL2P36404 184 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 PTENP60484 403 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 HYAL1Q12794 435 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 CAMK1Q14012 370 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 ZRSR1Q15695 479 aaKnown RBP17.25■□□□□ 0.35
CAPN1-213ENST00000527897 KCNT2Q6UVM3 1135 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 RBM23Q86U06 439 aaKnown RBP17.25■□□□□ 0.35
CAPN1-213ENST00000527897 CPB2Q96IY4 423 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 ZNF558Q96NG5 402 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 RAB34Q9BZG1 259 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 DBR1Q9UK59 544 aaKnown RBP17.25■□□□□ 0.35
CAPN1-213ENST00000527897 PCDHB2Q9Y5E7 798 aa17.25■□□□□ 0.35
CAPN1-213ENST00000527897 TTC28Q96AY4 2481 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-213ENST00000527897 PP2D1A8MPX8 630 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 RAB27AP51159 221 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 RNASELQ05823 741 aaKnown RBP17.24■□□□□ 0.35
CAPN1-213ENST00000527897 NCBP1Q09161 790 aaKnown RBP17.24■□□□□ 0.35
CAPN1-213ENST00000527897 CLUL1Q15846 466 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 ECM1Q16610 540 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 CSPP1Q1MSJ5 1256 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 RILPL1Q5EBL4 403 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 PADI6Q6TGC4 694 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 GLB1LQ6UWU2 654 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 DTHD1Q6ZMT9 781 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 MCPH1Q8NEM0 835 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 PPP2R3CQ969Q6 453 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 PGBD4Q96DM1 585 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 PABPC5Q96DU9 382 aaKnown RBP17.24■□□□□ 0.35
CAPN1-213ENST00000527897 MRPL9Q9BYD2 267 aaKnown RBP17.24■□□□□ 0.35
CAPN1-213ENST00000527897 GBP3Q9H0R5 595 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 TLR9Q9NR96 1032 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 DDX19AQ9NUU7 478 aaKnown RBP17.24■□□□□ 0.35
CAPN1-213ENST00000527897 KIAA1024Q9UPX6 916 aa17.24■□□□□ 0.35
CAPN1-213ENST00000527897 VPS37CA5D8V6 355 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-213ENST00000527897 NT5C1B-RDH14C9J2C7 533 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 TNFRSF10AO00220 468 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 TSPAN1O60635 241 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 ZC3H11AO75152 810 aaKnown RBP eCLIP17.23■□□□□ 0.35
CAPN1-213ENST00000527897 CDC25AP30304 524 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 HOXA11P31270 313 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-213ENST00000527897 CA8P35219 290 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 PLPP4Q5VZY2 271 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 KRT79Q5XKE5 535 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 NOTUMQ6P988 496 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 ADGRD2Q7Z7M1 963 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 TRAIPQ9BWF2 469 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 POLD4Q9HCU8 107 aa17.23■□□□□ 0.35
CAPN1-213ENST00000527897 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.23■□□□□ 0.35
CAPN1-213ENST00000527897 LAD1O00515 517 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 LINC01565O15544 149 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 LIG1P18858 919 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 PPM1AP35813 382 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 NRIP1P48552 1158 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 ALDH7A1P49419 539 aaKnown RBP17.22■□□□□ 0.35
CAPN1-213ENST00000527897 BCAR1P56945 870 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 ERVFC1P60507 584 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 MBTD1Q05BQ5 628 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 PDIA5Q14554 519 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 IL17AQ16552 155 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 TMEM132AQ24JP5 1023 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 LEXMQ3ZCV2 418 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 NOMO2Q5JPE7 1267 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 UBXN11Q5T124 520 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 PTCRAQ6ISU1 281 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-213ENST00000527897 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-213ENST00000527897 URGCPQ8TCY9 931 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 APOL6Q9BWW8 343 aa17.22■□□□□ 0.35
CAPN1-213ENST00000527897 TRIM6Q9C030 488 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms