RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ORC2Q13416 577 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-212ENST00000527887 XKR9Q5GH70 373 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 GLB1LQ6UWU2 654 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 TMEM184AQ6ZMB5 413 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 RBM23Q86U06 439 aaKnown RBP15.84■□□□□ 0.13
CAPN1-212ENST00000527887 KSR1Q8IVT5 923 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 TPH2Q8IWU9 490 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 SMRP1Q8NCR6 262 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 CNNM3Q8NE01 707 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 HELQQ8TDG4 1101 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 ZSCAN31Q96LW9 406 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-212ENST00000527887 MTMR9Q96QG7 549 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 MTRQ99707 1265 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 EIF2AK1Q9BQI3 630 aaKnown RBP15.84■□□□□ 0.13
CAPN1-212ENST00000527887 TTC12Q9H892 705 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-212ENST00000527887 AGPAT5Q9NUQ2 364 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 FAM105AQ9NUU6 356 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 CLEC1BQ9P126 229 aa15.84■□□□□ 0.13
CAPN1-212ENST00000527887 DCXO43602 365 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 JAK2O60674 1132 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 DGAT1O75907 488 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 SEC24BO95487 1268 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 AXLP30530 894 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 HMGN5P82970 282 aaKnown RBP15.83■□□□□ 0.12
CAPN1-212ENST00000527887 NCBP1Q09161 790 aaKnown RBP15.83■□□□□ 0.12
CAPN1-212ENST00000527887 CTTNQ14247 550 aaKnown RBP15.83■□□□□ 0.12
CAPN1-212ENST00000527887 EMC2Q15006 297 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 TMC7Q7Z402 723 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 FERMT3Q86UX7 667 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 SLC39A11Q8N1S5 342 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 ZNF579Q8NAF0 562 aaKnown RBP15.83■□□□□ 0.12
CAPN1-212ENST00000527887 KHSRPQ92945 711 aaKnown RBP eCLIP15.83■□□□□ 0.12
CAPN1-212ENST00000527887 TMEM143Q96AN5 459 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 TCF25Q9BQ70 676 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 LRFN3Q9BTN0 628 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 UBN1Q9NPG3 1134 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 ENTPD7Q9NQZ7 604 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 HCSTQ9UBK5 93 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 LOXHD1Q8IVV2 1947 aa15.83■□□□□ 0.12
CAPN1-212ENST00000527887 FAM205CA6NFA0 338 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 GLP2RO95838 553 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 SRGAP2CP0DJJ0 459 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 HOXB8P17481 243 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-212ENST00000527887 BCAR1P56945 870 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 CYP4A11Q02928 519 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 GIT2Q14161 759 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 TFDP1Q14186 410 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 CLUL1Q15846 466 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 NOMO2Q5JPE7 1267 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 MRPL10Q7Z7H8 261 aaKnown RBP15.82■□□□□ 0.12
CAPN1-212ENST00000527887 CCDC51Q96ER9 411 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 TMEM169Q96HH4 297 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 SH2B1Q9NRF2 756 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-212ENST00000527887 KANSL3Q9P2N6 904 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 DAXXQ9UER7 740 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-212ENST00000527887 CNTNAP2Q9UHC6 1331 aa15.82■□□□□ 0.12
CAPN1-212ENST00000527887 PRR33A8MZF0 331 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 PER2O15055 1255 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 DTNBO60941 627 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 OFD1O75665 1012 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 TXKP42681 527 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 KCNC3Q14003 757 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 SMC1AQ14683 1233 aaKnown RBP15.81■□□□□ 0.12
CAPN1-212ENST00000527887 FNDC1Q4ZHG4 1894 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-212ENST00000527887 PLPP4Q5VZY2 271 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 IFNLR1Q8IU57 520 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-212ENST00000527887 MRPL43Q8N983 215 aaKnown RBP15.81■□□□□ 0.12
CAPN1-212ENST00000527887 RNF149Q8NC42 400 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 URGCPQ8TCY9 931 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 C8orf76Q96K31 380 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 NFKBIZQ9BYH8 718 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 FOXP1Q9H334 677 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-212ENST00000527887 UPF2Q9HAU5 1272 aaKnown RBP15.81■□□□□ 0.12
CAPN1-212ENST00000527887 PCDHB2Q9Y5E7 798 aa15.81■□□□□ 0.12
CAPN1-212ENST00000527887 ERLIN2O94905 339 aa15.8■□□□□ 0.12
CAPN1-212ENST00000527887 HOXA11P31270 313 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-212ENST00000527887 RBM25P49756 843 aaKnown RBP15.8■□□□□ 0.12
CAPN1-212ENST00000527887 PTENP60484 403 aa15.8■□□□□ 0.12
CAPN1-212ENST00000527887 RNASELQ05823 741 aaKnown RBP15.8■□□□□ 0.12
CAPN1-212ENST00000527887 CCDC43Q96MW1 224 aaKnown RBP15.8■□□□□ 0.12
CAPN1-212ENST00000527887 TUFT1Q9NNX1 390 aa15.8■□□□□ 0.12
CAPN1-212ENST00000527887 BARX2Q9UMQ3 279 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-212ENST00000527887 HCN4Q9Y3Q4 1203 aa15.8■□□□□ 0.12
CAPN1-212ENST00000527887 PCDHGC5Q9Y5F6 944 aa15.8■□□□□ 0.12
CAPN1-212ENST00000527887 WDR81Q562E7 1941 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 ZBTB39O15060 712 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 NCLP19338 710 aaKnown RBP15.79■□□□□ 0.12
CAPN1-212ENST00000527887 ARL2P36404 184 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 TRAPPC10P48553 1259 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 RARRES1P49788 294 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 ST3GAL1Q11201 340 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 HERC4Q5GLZ8 1057 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-212ENST00000527887 NOTUMQ6P988 496 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 DDX53Q86TM3 631 aaKnown RBP15.79■□□□□ 0.12
CAPN1-212ENST00000527887 FBXO18Q8NFZ0 1043 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 ERMNQ8TAM6 284 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 SUSD6Q92537 303 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 CASP10Q92851 521 aa15.79■□□□□ 0.12
CAPN1-212ENST00000527887 PHF7Q9BWX1 381 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-212ENST00000527887 NRDE2Q9H7Z3 1164 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms