RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 CDC42EP4Q9H3Q1 356 aaKnown RBP13.41□□□□□ -0.26
TSKU-203ENST00000527881 OCEL1Q9H607 264 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 CCDC87Q9NVE4 849 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 SMAPO00193 183 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 DCTN3O75935 186 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 KHDC1Q4VXA5 237 aaKnown RBP13.41□□□□□ -0.26
TSKU-203ENST00000527881 MIGA2Q7L4E1 593 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 KRT25Q7Z3Z0 450 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 TBCKQ8TEA7 893 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 BLOC1S4Q9NUP1 217 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 DNAAF2Q9NVR5 837 aaKnown RBP13.41□□□□□ -0.26
TSKU-203ENST00000527881 STK17AQ9UEE5 414 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 MYH4Q9Y623 1939 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 SMCO2A6NFE2 343 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 FAM196BA6NMK8 535 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 BTNL10A8MVZ5 291 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 PODXLO00592 558 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 KRT36O76013 467 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 BAG3O95817 575 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 POU5F1Q01860 360 aaKnown RBP13.41□□□□□ -0.26
TSKU-203ENST00000527881 CFAP157Q5JU67 520 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 WASHC2DQ5SRD0 308 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 SEL1L2Q5TEA6 688 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 TRIM59Q8IWR1 403 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 GRAMD1AQ96CP6 724 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 MMTAG2Q9BU76 263 aaKnown RBP13.41□□□□□ -0.26
TSKU-203ENST00000527881 GANQ9H2C0 597 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 GRHL1Q9NZI5 618 aa13.41□□□□□ -0.26
TSKU-203ENST00000527881 PCDH11XQ9BZA7 1347 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 PHF2O75151 1096 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 TJP3O95049 919 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 STAT1P42224 750 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 TMED2Q15363 201 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 TRIP13Q15645 432 aaPredicted RBP13.4□□□□□ -0.26
TSKU-203ENST00000527881 KYNUQ16719 465 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 ZC2HC1CQ53FD0 456 aaPredicted RBP13.4□□□□□ -0.26
TSKU-203ENST00000527881 MIPOL1Q8TD10 442 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 MAGEB18Q96M61 343 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 LRRC27Q9C0I9 530 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 ZFP69BQ9UJL9 534 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 PASKQ96RG2 1323 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 SLIT3O75094 1523 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 ECEL1O95672 775 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 CYP2D6P10635 497 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 XRCC5P13010 732 aaKnown RBP13.4□□□□□ -0.26
TSKU-203ENST00000527881 CHRNA3P32297 505 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 ZBTB16Q05516 673 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 MPP2Q14168 576 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 FOXB2Q5VYV0 432 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 RFWD3Q6PCD5 774 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 PPP1R21Q6ZMI0 780 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 EPM2AIP1Q7L775 607 aaPredicted RBP13.4□□□□□ -0.26
TSKU-203ENST00000527881 UBL4BQ8N7F7 174 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 SPOCK2Q92563 424 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 ROPN1BQ9BZX4 212 aaPredicted RBP13.4□□□□□ -0.26
TSKU-203ENST00000527881 ROPN1Q9HAT0 212 aaPredicted RBP13.4□□□□□ -0.26
TSKU-203ENST00000527881 SLCO1B3Q9NPD5 702 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 MTUS1Q9ULD2 1270 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 CHKBQ9Y259 395 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 LRP6O75581 1613 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 TMEM94Q12767 1356 aa13.4□□□□□ -0.26
TSKU-203ENST00000527881 RASA4BC9J798 803 aa13.4□□□□□ -0.27
TSKU-203ENST00000527881 RASA4O43374 803 aa13.4□□□□□ -0.27
TSKU-203ENST00000527881 OPHN1O60890 802 aa13.4□□□□□ -0.27
TSKU-203ENST00000527881 DCAF12L1Q5VU92 463 aa13.4□□□□□ -0.27
TSKU-203ENST00000527881 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.27
TSKU-203ENST00000527881 ABTB1Q969K4 478 aaPredicted RBP13.4□□□□□ -0.27
TSKU-203ENST00000527881 DDX27Q96GQ7 796 aaKnown RBP13.4□□□□□ -0.27
TSKU-203ENST00000527881 C6orf50Q9HD87 102 aa13.4□□□□□ -0.27
TSKU-203ENST00000527881 PRKAG3Q9UGI9 489 aa13.4□□□□□ -0.27
TSKU-203ENST00000527881 PHTF1Q9UMS5 762 aa13.4□□□□□ -0.27
TSKU-203ENST00000527881 DDX3XO00571 662 aaKnown RBP eCLIP13.39□□□□□ -0.274e-19■■■■■ 31.5
TSKU-203ENST00000527881 ATP6V1G1O75348 118 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 RASA1P20936 1047 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 TFAP4Q01664 338 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 TAF1BQ53T94 588 aaPredicted RBP13.39□□□□□ -0.27
TSKU-203ENST00000527881 LRRC74BQ6ZQY2 392 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 CCDC65Q8IXS2 484 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
TSKU-203ENST00000527881 RFFLQ8WZ73 363 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 RAD54LQ92698 747 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 HIC2Q96JB3 615 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 CEP63Q96MT8 703 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 SERPINB12Q96P63 405 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 SH3GLB2Q9NR46 395 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 PDP2Q9P2J9 529 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 DCTN4Q9UJW0 460 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 STXBP5LQ9Y2K9 1186 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
TSKU-203ENST00000527881 IMPDH2P12268 514 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 DESP17661 470 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 CTTNQ14247 550 aaKnown RBP13.39□□□□□ -0.27
TSKU-203ENST00000527881 CGB2Q6NT52 195 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 ALG3Q92685 438 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 GCNT4Q9P109 453 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 LARSQ9P2J5 1176 aaKnown RBP13.39□□□□□ -0.27
TSKU-203ENST00000527881 ATXN10Q9UBB4 475 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 ANAPC4Q9UJX5 808 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 MROH5Q6ZUA9 1318 aa13.39□□□□□ -0.27
TSKU-203ENST00000527881 LAMB4A4D0S4 1761 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms