RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 KRT17Q04695 432 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 UBE3AQ05086 875 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 LRSAM1Q6UWE0 723 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 SIX5Q8N196 739 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 ZNF713Q8N859 430 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-210ENST00000527699 CRYGNQ8WXF5 182 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 ZMYND12Q9H0C1 365 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 GBP3Q9H0R5 595 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 POMKQ9H5K3 350 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 NRBP2Q9NSY0 501 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-210ENST00000527699 SPG21Q9NZD8 308 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 LIMD1Q9UGP4 676 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 SEPT9Q9UHD8 586 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-210ENST00000527699 INPP5FQ9Y2H2 1132 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 SNX14Q9Y5W7 946 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 CEP295Q9C0D2 2601 aa11.17□□□□□ -0.62
CAPN1-210ENST00000527699 CNOT1A5YKK6 2376 aaKnown RBP11.17□□□□□ -0.62
CAPN1-210ENST00000527699 FRYQ5TBA9 3013 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 A0A087WZ62 844 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 MEIS3P2A8K0S8 358 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 DDX11L8A8MPP1 907 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 WDR64B1ANS9 1081 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 PRPF3O43395 683 aaKnown RBP11.16□□□□□ -0.62
CAPN1-210ENST00000527699 GAS7O60861 476 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 ZC3H11AO75152 810 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPN1-210ENST00000527699 CDC45O75419 566 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 TDP2O95551 362 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 SSBP05455 408 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPN1-210ENST00000527699 EIF4BP23588 611 aaKnown RBP11.16□□□□□ -0.62
CAPN1-210ENST00000527699 TMOD1P28289 359 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 GPC3P51654 580 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 NLRP5P59047 1200 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 SETQ01105 290 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-210ENST00000527699 PLCB3Q01970 1234 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 STK3Q13188 491 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 BMP2KLQ5H9B9 411 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 BLOC1S2Q6QNY1 142 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 MIER3Q7Z3K6 550 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 KSR1Q8IVT5 923 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 SMAP1Q8IYB5 467 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-210ENST00000527699 LRRC43Q8N309 656 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 LENG9Q96B70 501 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 CDCA3Q99618 268 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-210ENST00000527699 FDXACB1Q9BRP7 624 aaPredicted RBP11.16□□□□□ -0.62
CAPN1-210ENST00000527699 TEKT3Q9BXF9 490 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 GLT8D2Q9H1C3 349 aa11.16□□□□□ -0.62
CAPN1-210ENST00000527699 ELAC1Q9H777 363 aaKnown RBP11.16□□□□□ -0.62
CAPN1-210ENST00000527699 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-210ENST00000527699 C2orf71A6NGG8 1288 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 MAGEB2O15479 319 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 CLASP2O75122 1294 aaKnown RBP11.15□□□□□ -0.62
CAPN1-210ENST00000527699 DARSP14868 501 aaKnown RBP11.15□□□□□ -0.62
CAPN1-210ENST00000527699 EPCAMP16422 314 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 BCAR1P56945 870 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 TBC1D8BQ0IIM8 1120 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 KRT32Q14532 448 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 SMC1AQ14683 1233 aaKnown RBP11.15□□□□□ -0.62
CAPN1-210ENST00000527699 LRCH2Q5VUJ6 765 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 PLA2G4FQ68DD2 849 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 TMEM173Q86WV6 379 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-210ENST00000527699 SLC39A11Q8N1S5 342 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 LINC01465Q8N7H1 131 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 TMEM87AQ8NBN3 555 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 TBCKQ8TEA7 893 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 CCDC12Q8WUD4 166 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-210ENST00000527699 BCL7CQ8WUZ0 217 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-210ENST00000527699 AIFM3Q96NN9 605 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 RNF216Q9NWF9 866 aaPredicted RBP11.15□□□□□ -0.62
CAPN1-210ENST00000527699 CEP131Q9UPN4 1083 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 HCFC2Q9Y5Z7 792 aa11.15□□□□□ -0.62
CAPN1-210ENST00000527699 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 HOXA2O43364 376 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 GNA11P29992 359 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 KCNC3Q14003 757 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 TSGA10IPQ3SY00 556 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 TWF2Q6IBS0 349 aaKnown RBP11.14□□□□□ -0.63
CAPN1-210ENST00000527699 PDE12Q6L8Q7 609 aaKnown RBP11.14□□□□□ -0.63
CAPN1-210ENST00000527699 RHPN2Q8IUC4 686 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 VPS52Q8N1B4 723 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 MRPL43Q8N983 215 aaKnown RBP11.14□□□□□ -0.63
CAPN1-210ENST00000527699 TDRD5Q8NAT2 981 aaKnown RBP11.14□□□□□ -0.63
CAPN1-210ENST00000527699 CASP10Q92851 521 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 FAM167AQ96KS9 214 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 NLRP4Q96MN2 994 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 NGRNQ9NPE2 291 aaKnown RBP11.14□□□□□ -0.63
CAPN1-210ENST00000527699 DNAJB4Q9UDY4 337 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 PIN4Q9Y237 131 aaKnown RBP11.14□□□□□ -0.63
CAPN1-210ENST00000527699 LZTS1Q9Y250 596 aa11.14□□□□□ -0.63
CAPN1-210ENST00000527699 SPEGQ15772 3267 aa11.13□□□□□ -0.63
CAPN1-210ENST00000527699 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.13□□□□□ -0.63
CAPN1-210ENST00000527699 ESYT2A0FGR8 921 aa11.13□□□□□ -0.63
CAPN1-210ENST00000527699 C1QTNF9BB2RNN3 333 aa11.13□□□□□ -0.63
CAPN1-210ENST00000527699 HMGB1P09429 215 aaKnown RBP11.13□□□□□ -0.63
CAPN1-210ENST00000527699 C1QTNF9P0C862 333 aa11.13□□□□□ -0.63
CAPN1-210ENST00000527699 RPS6KB1P23443 525 aa11.13□□□□□ -0.63
CAPN1-210ENST00000527699 PDIA3P30101 505 aaKnown RBP11.13□□□□□ -0.63
CAPN1-210ENST00000527699 CIITAP33076 1130 aa11.13□□□□□ -0.63
CAPN1-210ENST00000527699 PPM1AP35813 382 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms