RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 ANKLE2Q86XL3 938 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 CEP70Q8NHQ1 597 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.19□□□□□ -1.26
RDX-203ENST00000527537 CKAP2Q8WWK9 683 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 STAMQ92783 540 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 PHKBQ93100 1093 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 GRAMD1AQ96CP6 724 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 PCMTD1Q96MG8 357 aaPredicted RBP7.19□□□□□ -1.26
RDX-203ENST00000527537 BLZF1Q9H2G9 400 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 CUEDC2Q9H467 287 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 RETREG1Q9H6L5 497 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 USP29Q9HBJ7 922 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 CHKBQ9Y259 395 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 CTDP1Q9Y5B0 961 aaPredicted RBP7.19□□□□□ -1.26
RDX-203ENST00000527537 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.19□□□□□ -1.26
RDX-203ENST00000527537 PNPLA7Q6ZV29 1317 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 POTEIP0CG38 1075 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 PTPN4P29074 926 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 PRCPP42785 496 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 SLC1A4P43007 532 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 RXRGP48443 463 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 DSG1Q02413 1049 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 TFCP2Q12800 502 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 KCTD19Q17RG1 926 aaPredicted RBP7.19□□□□□ -1.26
RDX-203ENST00000527537 C6orf183Q5T699 404 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 DEPDC1Q5TB30 811 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 ZNF449Q6P9G9 518 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 DTX3LQ8TDB6 740 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 ACTRT1Q8TDG2 376 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 RAPGEF4Q8WZA2 1011 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 DDX12PQ92771 950 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 CCT7Q99832 543 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 TUBGCP2Q9BSJ2 902 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 CENPOQ9BU64 300 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 AP1M1Q9BXS5 423 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 GBA3Q9H227 469 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 SYNCQ9H7C4 482 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 TRPC7Q9HCX4 862 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 MAGEC2Q9UBF1 373 aaPredicted RBP7.19□□□□□ -1.26
RDX-203ENST00000527537 AMACRQ9UHK6 382 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 HBS1LQ9Y450 684 aaKnown RBP7.19□□□□□ -1.26
RDX-203ENST00000527537 DDX60Q8IY21 1712 aaKnown RBP7.19□□□□□ -1.26
RDX-203ENST00000527537 XDHP47989 1333 aa7.19□□□□□ -1.26
RDX-203ENST00000527537 SOS2Q07890 1332 aaPredicted RBP7.19□□□□□ -1.26
RDX-203ENST00000527537 POTEFA5A3E0 1075 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 NEURL1BA8MQ27 555 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 DDX3XO00571 662 aaKnown RBP eCLIP7.18□□□□□ -1.26
RDX-203ENST00000527537 TMED10P49755 219 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 GFPT1Q06210 699 aaPredicted RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 GRM2Q14416 872 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 PDIA6Q15084 440 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 ZNF790Q6PG37 636 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 WDR75Q8IWA0 830 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 MB21D2Q8IYB1 491 aaPredicted RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 FAM186BQ8IYM0 893 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 ALDH16A1Q8IZ83 802 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 PPP1R10Q96QC0 940 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 TGS1Q96RS0 853 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 DUSP9Q99956 384 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 TMEM109Q9BVC6 243 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 MRPL46Q9H2W6 279 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 DNAJC5Q9H3Z4 198 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 DKK3Q9UBP4 350 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 CARD8Q9Y2G2 431 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 UTP11Q9Y3A2 253 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 NFAT5O94916 1531 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 TMEM120BA0PK00 339 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 SH3PXD2BA1X283 911 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 KCNK3O14649 394 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 ADAM23O75077 832 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 CBX6O95503 412 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 NAT2P11245 290 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 ANTXR2P58335 489 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 GCKRQ14397 625 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 SLC29A2Q14542 456 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 NAB2Q15742 525 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 ASTE1Q2TB18 679 aaPredicted RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 TMEM214Q6NUQ4 689 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 C1orf228Q6PIY5 440 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 BTNL9Q6UXG8 535 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 IZUMO2Q6UXV1 221 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 ACAD11Q709F0 780 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 TMC4Q7Z404 712 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 EPS8L3Q8TE67 593 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 SYMPKQ92797 1274 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 DDX17Q92841 729 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 NEUROD6Q96NK8 337 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 ECSITQ9BQ95 431 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 LBHD1Q9BQE6 289 aaPredicted RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 NACAP1Q9BZK3 213 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 SLITRK6Q9H5Y7 841 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 QPCTLQ9NXS2 382 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 CNOT7Q9UIV1 285 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 DBNLQ9UJU6 430 aaKnown RBP7.18□□□□□ -1.26
RDX-203ENST00000527537 CCPG1Q9ULG6 757 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 PRELID1Q9Y255 219 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 GDAQ9Y2T3 454 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 MYH4Q9Y623 1939 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 KDM3BQ7LBC6 1761 aa7.18□□□□□ -1.26
RDX-203ENST00000527537 CCDC188H7C350 402 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms