RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 ATL2Q8NHH9 583 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 CCDC26Q8TAB7 109 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 SH3RF2Q8TEC5 729 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 PPM1EQ8WY54 764 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 KIF1BPQ96EK5 621 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 FAXDC2Q96IV6 333 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 ZNF396Q96N95 335 aaPredicted RBP4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 SH3GL3Q99963 347 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 ARPC5LQ9BPX5 153 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 LZTS2Q9BRK4 669 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 UBA5Q9GZZ9 404 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 IRAK4Q9NWZ3 460 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 CWC25Q9NXE8 425 aaPredicted RBP4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 GPRC5BQ9NZH0 403 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 FRMD4BQ9Y2L6 1034 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 VPS8Q8N3P4 1428 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 SMC2O95347 1197 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 RECKO95980 971 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 DDIT3P35638 169 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 USP8P40818 1118 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 ZC3H6P61129 1189 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 NUCB2P80303 420 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 NCBP1Q09161 790 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 GRIK3Q13003 919 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 PDIA5Q14554 519 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 SART3Q15020 963 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 STILQ15468 1287 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 KLHL40Q2TBA0 621 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 TMCO4Q5TGY1 634 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 ZKSCAN2Q63HK3 967 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 LEKR1Q6ZMV7 388 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 USP53Q70EK8 1073 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 GET4Q7L5D6 327 aaPredicted RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 DRAXINQ8NBI3 349 aaPredicted RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 ZNF397Q8NF99 534 aaPredicted RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 MIEF2Q96C03 454 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 IER2Q9BTL4 223 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 OR10A2Q9H208 303 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 PRKRIP1Q9H875 184 aaPredicted RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 AGO3Q9H9G7 860 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 ACTR10Q9NZ32 417 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 CPSF2Q9P2I0 782 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 RRP15Q9Y3B9 282 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 V9GYY5 206 aaPredicted RBP4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 CLIP1P30622 1438 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 YEATS2Q9ULM3 1422 aa4.28□□□□□ -1.72
CLNS1A-209ENST00000527299 ROCK2O75116 1388 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 BAZ1AQ9NRL2 1556 aaPredicted RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 MAP3K1Q13233 1512 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 GOLGA3Q08378 1498 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 A0A1W2PQU0 124 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 EXOC5O00471 708 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 PES1O00541 588 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 SMAD7O15105 426 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 TPD52L2O43399 206 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 CDKL5O76039 1030 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 BAG4O95429 457 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 FAM200BP0CF97 657 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 NAT1P18440 290 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 PAX3P23760 479 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 ALDH1B1P30837 517 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 ADCY8P40145 1251 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 PRPHP41219 470 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 RPS6KA3P51812 740 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 NAP1L1P55209 391 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 RHBDL3P58872 404 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 FSTL1Q12841 308 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 FOXD4Q12950 439 aaPredicted RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 GPS2Q13227 327 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 PCOLCEQ15113 449 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 RBBP5Q15291 538 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 HSP90AB2PQ58FF8 381 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 CCDC181Q5TID7 509 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 LARP1BQ659C4 914 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 KLHL10Q6JEL2 608 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 NOL8Q76FK4 1167 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 CCDC186Q7Z3E2 898 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 APBB1IPQ7Z5R6 666 aaPredicted RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 TEX11Q8IYF3 940 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 FBXO18Q8NFZ0 1043 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 GOLGA5Q8TBA6 731 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 GPT2Q8TD30 523 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 DCAF4Q8WV16 495 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 SNX21Q969T3 373 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 TMEM176AQ96HP8 235 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 WNK4Q96J92 1243 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 MPHOSPH9Q99550 1183 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 ZFYVE21Q9BQ24 234 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 CD244Q9BZW8 370 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 IQCGQ9H095 443 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 EPN3Q9H201 632 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 UTP6Q9NYH9 597 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 PSD3Q9NYI0 1048 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 ARHGAP28Q9P2N2 729 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 MIA2Q96PC5 1412 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 KDRP35968 1356 aa4.27□□□□□ -1.73
CLNS1A-209ENST00000527299 TCRBV5S4A2TA0A5A2 114 aa4.26□□□□□ -1.73
CLNS1A-209ENST00000527299 FAM90A27PA6NNH2 459 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms