RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 LIG1P18858 919 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 PEX3P56589 373 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 FAM160A1Q05DH4 1040 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 DMP1Q13316 513 aaPredicted RBP18.39■□□□□ 0.53
SMCO4-204ENST00000527149 DSC3Q14574 896 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 TPRNQ4KMQ1 711 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 OTOP2Q7RTS6 562 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 TAS1R3Q7RTX0 852 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 GRAMD1CQ8IYS0 662 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 NTPCRQ9BSD7 190 aaKnown RBP18.39■□□□□ 0.53
SMCO4-204ENST00000527149 PARVGQ9HBI0 331 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 CHD7Q9P2D1 2997 aa18.39■□□□□ 0.53
SMCO4-204ENST00000527149 COL4A6Q14031 1691 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.38■□□□□ 0.53
SMCO4-204ENST00000527149 GOLGA6L4A6NEF3 574 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 GPR182O15218 404 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 ZNF202O95125 648 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 KRT18P05783 430 aaKnown RBP18.38■□□□□ 0.53
SMCO4-204ENST00000527149 SFPQP23246 707 aaKnown RBP eCLIP18.38■□□□□ 0.53
SMCO4-204ENST00000527149 CASP1P29466 404 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 WDR5P61964 334 aaKnown RBP18.38■□□□□ 0.53
SMCO4-204ENST00000527149 PPP4R3CPQ6ZMV5 832 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 KRBA2Q6ZNG9 492 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 RTN4RL1Q86UN2 441 aaPredicted RBP18.38■□□□□ 0.53
SMCO4-204ENST00000527149 PAGE5Q96GU1 130 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 IFT74Q96LB3 600 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 C7orf25Q9BPX7 421 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 FZD8Q9H461 694 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 AGPAT5Q9NUQ2 364 aa18.38■□□□□ 0.53
SMCO4-204ENST00000527149 ABHD14A-ACY1A0A1B0GW23 586 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 TSPAN1O60635 241 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 TBCAO75347 108 aaKnown RBP18.37■□□□□ 0.53
SMCO4-204ENST00000527149 FAM13AO94988 1023 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 ACTN1P12814 892 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 HOXA11P31270 313 aaPredicted RBP18.37■□□□□ 0.53
SMCO4-204ENST00000527149 NCKAP1LP55160 1127 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 UBE2HP62256 183 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 EHHADHQ08426 723 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 NFX1Q12986 1120 aaKnown RBP18.37■□□□□ 0.53
SMCO4-204ENST00000527149 CUL4BQ13620 913 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 FAM187BQ17R55 369 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 SFR1Q86XK3 245 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 CEP57L1Q8IYX8 460 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 TDHQ8IZJ6 230 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 TMEM161BQ8NDZ6 487 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 INO80BQ9C086 356 aaPredicted RBP18.37■□□□□ 0.53
SMCO4-204ENST00000527149 C2orf40Q9H1Z8 148 aa18.37■□□□□ 0.53
SMCO4-204ENST00000527149 TSPYL2Q9H2G4 693 aaPredicted RBP18.37■□□□□ 0.53
SMCO4-204ENST00000527149 COLQQ9Y215 455 aaPredicted RBP18.37■□□□□ 0.53
SMCO4-204ENST00000527149 TTLL13PA6NNM8 815 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 INO80B-WBP1J3KQ70 363 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 SLC16A4O15374 487 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 B4GALT5O43286 388 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 NR1I2O75469 434 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 DEFB103AP81534 67 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 IKBKEQ14164 716 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 PCBP1Q15365 356 aaKnown RBP eCLIP18.36■□□□□ 0.53
SMCO4-204ENST00000527149 ODR4Q5SWX8 454 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.36■□□□□ 0.53
SMCO4-204ENST00000527149 FAM43BQ6ZT52 329 aaPredicted RBP18.36■□□□□ 0.53
SMCO4-204ENST00000527149 PHLPP2Q6ZVD8 1323 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 CATSPER4Q7RTX7 472 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 ZBTB8OSQ8IWT0 167 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 DEPTORQ8TB45 409 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 GBF1Q92538 1859 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 RNPC3Q96LT9 517 aaKnown RBP18.36■□□□□ 0.53
SMCO4-204ENST00000527149 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 FTHL17Q9BXU8 183 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 BLZF1Q9H2G9 400 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 KMT5AQ9NQR1 393 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 LMBRD1Q9NUN5 540 aa18.36■□□□□ 0.53
SMCO4-204ENST00000527149 LARSQ9P2J5 1176 aaKnown RBP18.36■□□□□ 0.53
SMCO4-204ENST00000527149 CNTNAP2Q9UHC6 1331 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 A0A1W2PPC1 479 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 CCDC169A6NNP5 214 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 KLRC4O43908 158 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 EFCAB14O75071 495 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 PRPF40AO75400 957 aaKnown RBP18.35■□□□□ 0.53
SMCO4-204ENST00000527149 PPP1R37O75864 691 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 PRR29P0C7W0 189 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 MAPTP10636 758 aaKnown RBP18.35■□□□□ 0.53
SMCO4-204ENST00000527149 GAP43P17677 238 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 AFMP43652 599 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 EFNA5P52803 228 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 AMPD3Q01432 767 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 CRIPAKQ8N1N5 446 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 MYCT1Q8N699 235 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 PRIMPOLQ96LW4 560 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 STRA6Q9BX79 667 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 FGFBP2Q9BYJ0 223 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 LRRC27Q9C0I9 530 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 TMEM134Q9H6X4 195 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 OLFML3Q9NRN5 406 aa18.35■□□□□ 0.53
SMCO4-204ENST00000527149 SZT2Q5T011 3432 aa18.34■□□□□ 0.53
SMCO4-204ENST00000527149 CDH23Q9H251 3354 aa18.34■□□□□ 0.53
SMCO4-204ENST00000527149 C9IYK1 514 aa18.34■□□□□ 0.53
SMCO4-204ENST00000527149 ENPP3O14638 875 aa18.34■□□□□ 0.53
SMCO4-204ENST00000527149 GTPBP6O43824 516 aaPredicted RBP18.34■□□□□ 0.53
SMCO4-204ENST00000527149 TRAK2O60296 914 aa18.34■□□□□ 0.53
SMCO4-204ENST00000527149 PRKCBP05771 671 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms