RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 CDY2AQ9Y6F7 541 aa19.18■□□□□ 0.66
CCS-204ENST00000526066 ATG2AQ2TAZ0 1938 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 POLR2DO15514 142 aaKnown RBP19.17■□□□□ 0.66
CCS-204ENST00000526066 OATP04181 439 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 STAG3L1P0CL83 205 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 ATP4AP20648 1035 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 LTBRP36941 435 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 SYKP43405 635 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 IGBP1P78318 339 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 MRPS6P82932 125 aaKnown RBP19.17■□□□□ 0.66
CCS-204ENST00000526066 ZRSR1Q15695 479 aaKnown RBP19.17■□□□□ 0.66
CCS-204ENST00000526066 E2F4Q16254 413 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 NAALADL2Q58DX5 795 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 FBXO47Q5MNV8 452 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 FMR1NBQ8N0W7 255 aaPredicted RBP19.17■□□□□ 0.66
CCS-204ENST00000526066 ENGASEQ8NFI3 743 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 ATP8B4Q8TF62 1192 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 DNAJB3Q8WWF6 145 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 P2RX5Q93086 422 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 FBXL18Q96ME1 805 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 ALG13Q9NP73 1137 aaKnown RBP19.17■□□□□ 0.66
CCS-204ENST00000526066 ANKEF1Q9NU02 776 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 MUTYHQ9UIF7 546 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 DNM3Q9UQ16 869 aa19.17■□□□□ 0.66
CCS-204ENST00000526066 RRN3P2A6NIE6 340 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 DGKIO75912 1065 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 EYA4O95677 639 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 YWHABP31946 246 aaKnown RBP19.16■□□□□ 0.66
CCS-204ENST00000526066 STAT6P42226 847 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 MGAT3Q09327 533 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 PLCB4Q15147 1175 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 HFE2Q6ZVN8 426 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 OTUD6AQ7L8S5 288 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 CKAP2LQ8IYA6 745 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 CMTR2Q8IYT2 770 aaKnown RBP19.16■□□□□ 0.66
CCS-204ENST00000526066 PDILTQ8N807 584 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 BBXQ8WY36 941 aaPredicted RBP19.16■□□□□ 0.66
CCS-204ENST00000526066 NIFKQ9BYG3 293 aaKnown RBP19.16■□□□□ 0.66
CCS-204ENST00000526066 FAM49AQ9H0Q0 323 aaPredicted RBP19.16■□□□□ 0.66
CCS-204ENST00000526066 NRBP2Q9NSY0 501 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 BLOC1S4Q9NUP1 217 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 DBR1Q9UK59 544 aaKnown RBP19.16■□□□□ 0.66
CCS-204ENST00000526066 TTC3P53804 2025 aa19.16■□□□□ 0.66
CCS-204ENST00000526066 HBP1O60381 514 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 TBX10O75333 385 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 ZNF202O95125 648 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 MBD3O95983 291 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 LIG1P18858 919 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 DLX2Q07687 328 aaPredicted RBP19.15■□□□□ 0.66
CCS-204ENST00000526066 SNW1Q13573 536 aaKnown RBP19.15■□□□□ 0.66
CCS-204ENST00000526066 TPRNQ4KMQ1 711 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 HERC4Q5GLZ8 1057 aaPredicted RBP19.15■□□□□ 0.66
CCS-204ENST00000526066 ANO5Q75V66 913 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 KCNK18Q7Z418 384 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 RNF135Q8IUD6 432 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 NPAS4Q8IUM7 802 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 DHX58Q96C10 678 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 ZNF689Q96CS4 500 aaPredicted RBP19.15■□□□□ 0.66
CCS-204ENST00000526066 PLIN2Q99541 437 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 PANK2Q9BZ23 570 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 MAGEF1Q9HAY2 307 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 RC3H2Q9HBD1 1191 aaKnown RBP19.15■□□□□ 0.66
CCS-204ENST00000526066 LRFN2Q9ULH4 789 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 PLAGL2Q9UPG8 496 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 TRPC6Q9Y210 931 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 PPME1Q9Y570 386 aa19.15■□□□□ 0.66
CCS-204ENST00000526066 MBLAC1A4D2B0 266 aaPredicted RBP19.14■□□□□ 0.65
CCS-204ENST00000526066 CD52P31358 61 aa19.14■□□□□ 0.65
CCS-204ENST00000526066 PAK2Q13177 524 aa19.14■□□□□ 0.65
CCS-204ENST00000526066 PIGOQ8TEQ8 1089 aa19.14■□□□□ 0.65
CCS-204ENST00000526066 LRRC15Q8TF66 581 aa19.14■□□□□ 0.65
CCS-204ENST00000526066 LARP4BQ92615 738 aaKnown RBP19.14■□□□□ 0.65
CCS-204ENST00000526066 RAD54LQ92698 747 aa19.14■□□□□ 0.65
CCS-204ENST00000526066 TIGD1Q96MW7 591 aa19.14■□□□□ 0.65
CCS-204ENST00000526066 RNF216Q9NWF9 866 aaPredicted RBP19.14■□□□□ 0.65
CCS-204ENST00000526066 MRPL42Q9Y6G3 142 aaKnown RBP19.14■□□□□ 0.65
CCS-204ENST00000526066 SQORQ9Y6N5 450 aa19.14■□□□□ 0.65
CCS-204ENST00000526066 WDR81Q562E7 1941 aa19.13■□□□□ 0.65
CCS-204ENST00000526066 E9PMD0 336 aa19.13■□□□□ 0.65
CCS-204ENST00000526066 LINC01565O15544 149 aa19.13■□□□□ 0.65
CCS-204ENST00000526066 ACTN4O43707 911 aaKnown RBP19.13■□□□□ 0.65
CCS-204ENST00000526066 NR1I2O75469 434 aa19.13■□□□□ 0.65
CCS-204ENST00000526066 SLFN14P0C7P3 912 aa19.13■□□□□ 0.65
CCS-204ENST00000526066 RARRES1P49788 294 aa19.13■□□□□ 0.65
CCS-204ENST00000526066 ADAM15Q13444 863 aa19.13■□□□□ 0.65
CCS-204ENST00000526066 TARBP2Q15633 366 aaKnown RBP19.13■□□□□ 0.65
CCS-204ENST00000526066 PAN2Q504Q3 1202 aaKnown RBP19.13■□□□□ 0.65
CCS-204ENST00000526066 SUGP1Q8IWZ8 645 aaKnown RBP19.13■□□□□ 0.65
CCS-204ENST00000526066 SYT2Q8N9I0 419 aaPredicted RBP19.13■□□□□ 0.65
CCS-204ENST00000526066 SEPT9Q9UHD8 586 aaPredicted RBP19.13■□□□□ 0.65
CCS-204ENST00000526066 TRPV2Q9Y5S1 764 aa19.13■□□□□ 0.65
CCS-204ENST00000526066 COL1A2P08123 1366 aa19.13■□□□□ 0.65
CCS-204ENST00000526066 MYH9P35579 1960 aaKnown RBP19.12■□□□□ 0.65
CCS-204ENST00000526066 FSD2A1L4K1 749 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 ZBTB39O15060 712 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 KINO60870 393 aaKnown RBP19.12■□□□□ 0.65
CCS-204ENST00000526066 LINC00271P0C7V0 271 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 PLA2G4BP0C869 781 aa19.12■□□□□ 0.65
CCS-204ENST00000526066 GTF2F1P35269 517 aaKnown RBP eCLIP19.12■□□□□ 0.65
CCS-204ENST00000526066 SLC12A3P55017 1021 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms