RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-216	ENST00000525997	CRYBB1	P53674	252 aa	Predicted RBP	5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	NCKAP1L	P55160	1127 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	PEX3	P56589	373 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	IRX5	P78411	483 aa	Predicted RBP	5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	MDM2	Q00987	491 aa	Predicted RBP	5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	RAD51AP2	Q09MP3	1159 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	FAM187B	Q17R55	369 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	ARSH	Q5FYA8	562 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	MARCH8	Q5T0T0	291 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	SLFN12L	Q6IEE8	588 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	FOXR2	Q6PJQ5	311 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	RBM43	Q6ZSC3	357 aa	Known RBP	5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	HAUS6	Q7Z4H7	955 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	SFR1	Q86XK3	245 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	HOMEZ	Q8IX15	550 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	HACE1	Q8IYU2	909 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	KIAA0319L	Q8IZA0	1049 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	MYOCD	Q8IZQ8	938 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	SYCP3	Q8IZU3	236 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	GUF1	Q8N442	669 aa	Known RBP	5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	LRRC71	Q8N4P6	559 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	SPATA20	Q8TB22	786 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	KCNV2	Q8TDN2	545 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	TRAPPC12	Q8WVT3	735 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	DNAJB3	Q8WWF6	145 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	PRPF31	Q8WWY3	499 aa	Known RBP	5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	RSPH1	Q8WYR4	309 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	STAM	Q92783	540 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	APBB2	Q92870	758 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	CCDC51	Q96ER9	411 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	BICD1	Q96G01	975 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	DHTKD1	Q96HY7	919 aa	Predicted RBP	5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	ACCS	Q96QU6	501 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	CEP89	Q96ST8	783 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	ADPGK	Q9BRR6	497 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	MRPL4	Q9BYD3	311 aa	Known RBP	5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	CELF4	Q9BZC1	486 aa	Known RBP	5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	XPNPEP1	Q9NQW7	623 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	TMEM39A	Q9NV64	488 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	ATP11B	Q9Y2G3	1177 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	TELO2	Q9Y4R8	837 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	CDY2A	Q9Y6F7	541 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	HTT	P42858	3142 aa		5.77	□□□□□ -1.49
PUM1-216	ENST00000525997	MYH11	P35749	1972 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	GRIN2D	O15399	1336 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	MKI67	P46013	3256 aa	Known RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	DENND3	A2RUS2	1198 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	SMTNL1	A8MU46	457 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	RSPH10B2	B2RC85	870 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	HNRNPDL	O14979	420 aa	Known RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	N4BP3	O15049	544 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	KLRC4	O43908	158 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	EFCAB14	O75071	495 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	CD4	P01730	458 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	VTN	P04004	478 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	PRKCB	P05771	671 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	RSPH10B	P0C881	870 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	SRGAP2C	P0DJJ0	459 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	DARS	P14868	501 aa	Known RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	GLRA2	P23416	452 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	EIF4B	P23588	611 aa	Known RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	ERCC5	P28715	1186 aa	Predicted RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	LIG4	P49917	911 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	ATN1	P54259	1190 aa	Predicted RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	NLRP11	P59045	1033 aa	Known RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	NLRP12	P59046	1061 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	PTEN	P60484	403 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	GTF2B	Q00403	316 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	TLE2	Q04725	743 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	LRRC63	Q05C16	580 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	EHHADH	Q08426	723 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	MAPK7	Q13164	816 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	PAK2	Q13177	524 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	PRPF4B	Q13523	1007 aa	Known RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	CAPS	Q13938	189 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	MORC3	Q14149	939 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	MYBPC2	Q14324	1141 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	TPD52L1	Q16890	204 aa	Predicted RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	KNOP1	Q1ED39	458 aa	Known RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	ZSCAN23	Q3MJ62	389 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	DCAF4L1	Q3SXM0	396 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	TRIM60	Q495X7	471 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	FAM26D	Q5JW98	314 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	NOTUM	Q6P988	496 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	ZPBP2	Q6X784	338 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	TSHZ1	Q6ZSZ6	1077 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	LRRC8D	Q7L1W4	858 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	CATSPER4	Q7RTX7	472 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	ZNF720	Q7Z2F6	126 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	USP37	Q86T82	979 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	FAM114A1	Q8IWE2	563 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	GRAMD1C	Q8IYS0	662 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	RPUSD2	Q8IZ73	545 aa	Known RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	TMEM199	Q8N511	208 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	ANKRD20A12P	Q8NF67	263 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	ASAP3	Q8TDY4	903 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	LRRC15	Q8TF66	581 aa		5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	NOC3L	Q8WTT2	800 aa	Known RBP	5.76	□□□□□ -1.49
PUM1-216	ENST00000525997	PHF12	Q96QT6	1004 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms