RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 E9PMD0 336 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 C5orf67F2Z3F1 127 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 H3BNC9 293 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 HOXA11P31270 313 aaPredicted RBP13.17□□□□□ -0.3
CDC27-202ENST00000525495 GRIN1Q05586 938 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 GPM6BQ13491 265 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
CDC27-202ENST00000525495 KRT79Q5XKE5 535 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 ARL6IP4Q66PJ3 421 aaKnown RBP13.17□□□□□ -0.3
CDC27-202ENST00000525495 TWF2Q6IBS0 349 aaKnown RBP13.17□□□□□ -0.3
CDC27-202ENST00000525495 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
CDC27-202ENST00000525495 HSCBQ8IWL3 235 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDC27-202ENST00000525495 BSNDQ8WZ55 320 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 CHST12Q9NRB3 414 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 DACT1Q9NYF0 836 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 PLXNA4Q9HCM2 1894 aa13.17□□□□□ -0.3
CDC27-202ENST00000525495 MEIS3P2A8K0S8 358 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 CYP11B2P19099 503 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 PHKA2P46019 1235 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 MBTD1Q05BQ5 628 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 POU5F1BQ06416 359 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 LONRF3Q496Y0 759 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 CLLU1OSQ5K130 101 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 RNF169Q8NCN4 708 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 CASD1Q96PB1 797 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 PNMA5Q96PV4 448 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 TRAIPQ9BWF2 469 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 FAM105AQ9NUU6 356 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 MYO7AQ13402 2215 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 INO80B-WBP1J3KQ70 363 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 GRM6O15303 877 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 STX6O43752 255 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 TSPAN1O60635 241 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 TFDP1Q14186 410 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 PTPAQ15257 358 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 ZRSR1Q15695 479 aaKnown RBP13.16□□□□□ -0.3
CDC27-202ENST00000525495 AMHR2Q16671 573 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 HYIQ5T013 277 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 LRRC55Q6ZSA7 311 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 LPPQ93052 612 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 PLIN2Q99541 437 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 NFKBIZQ9BYH8 718 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 TMEM117Q9H0C3 514 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 CWH43Q9H720 699 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 TYW1Q9NV66 732 aaKnown RBP13.16□□□□□ -0.3
CDC27-202ENST00000525495 LMCD1Q9NZU5 365 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 RWDD3Q9Y3V2 267 aa13.16□□□□□ -0.3
CDC27-202ENST00000525495 LRRIQ4A6NIV6 560 aa13.15□□□□□ -0.3
CDC27-202ENST00000525495 B4GALT5O43286 388 aa13.15□□□□□ -0.3
CDC27-202ENST00000525495 EYA4O95677 639 aa13.15□□□□□ -0.3
CDC27-202ENST00000525495 EOMESO95936 686 aa13.15□□□□□ -0.3
CDC27-202ENST00000525495 RB1P06400 928 aa13.15□□□□□ -0.3
CDC27-202ENST00000525495 HELQQ8TDG4 1101 aa13.15□□□□□ -0.3
CDC27-202ENST00000525495 MRPL38Q96DV4 380 aaKnown RBP13.15□□□□□ -0.3
CDC27-202ENST00000525495 CPB2Q96IY4 423 aa13.15□□□□□ -0.3
CDC27-202ENST00000525495 C11orf84Q9BUA3 381 aaPredicted RBP13.15□□□□□ -0.3
CDC27-202ENST00000525495 ALG13Q9NP73 1137 aaKnown RBP13.15□□□□□ -0.3
CDC27-202ENST00000525495 DNM3Q9UQ16 869 aa13.15□□□□□ -0.3
CDC27-202ENST00000525495 TTLL13PA6NNM8 815 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 HOXA2O43364 376 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 ZNF623O75123 536 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 ERLIN2O94905 339 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 BMP15O95972 392 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 ITGB1P05556 798 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 CAMK1Q14012 370 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 CDCA2Q69YH5 1023 aaPredicted RBP13.14□□□□□ -0.31
CDC27-202ENST00000525495 DAW1Q8N136 415 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 KLHL23Q8NBE8 558 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 LRRC15Q8TF66 581 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 P2RX5Q93086 422 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 KIFC3Q9BVG8 833 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 RUSC1Q9BVN2 902 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 PLVAPQ9BX97 442 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 EIF2AQ9BY44 585 aaKnown RBP13.14□□□□□ -0.31
CDC27-202ENST00000525495 PLAGL2Q9UPG8 496 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 PCDHB2Q9Y5E7 798 aa13.14□□□□□ -0.31
CDC27-202ENST00000525495 BRWD1Q9NSI6 2320 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 MYH11P35749 1972 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 CSPG5O95196 566 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 ARF4P18085 180 aaPredicted RBP13.13□□□□□ -0.31
CDC27-202ENST00000525495 DNAJB1P25685 340 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
CDC27-202ENST00000525495 PBX3P40426 434 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 RAB27AP51159 221 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 CEBPZQ03701 1054 aaKnown RBP13.13□□□□□ -0.31
CDC27-202ENST00000525495 PCBP1Q15365 356 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDC27-202ENST00000525495 SKIV2LQ15477 1246 aaKnown RBP13.13□□□□□ -0.31
CDC27-202ENST00000525495 TMEM119Q4V9L6 283 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 SPOUT1Q5T280 376 aaKnown RBP13.13□□□□□ -0.31
CDC27-202ENST00000525495 RINT1Q6NUQ1 792 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 AGMOQ6ZNB7 445 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 C1orf186Q6ZWK4 172 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 CABP7Q86V35 215 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 CDR2LQ86X02 465 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms