RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 PHKA2P46019 1235 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 USP11P51784 963 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 NUBP1P53384 320 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 TARBP2Q15633 366 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 NTRK3Q16288 839 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 TWF2Q6IBS0 349 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 KIAA1841Q6NSI8 718 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 TMEM105Q8N8V8 129 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 TMEM87AQ8NBN3 555 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 TBC1D32Q96NH3 1257 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 FDXACB1Q9BRP7 624 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 SLC26A6Q9BXS9 759 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 RNF26Q9BY78 433 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 CHST12Q9NRB3 414 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 DZANK1Q9NVP4 752 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 DBR1Q9UK59 544 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 PIN4Q9Y237 131 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 MIA3Q5JRA6 1907 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 MYH15Q9Y2K3 1946 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 TRIP11Q15643 1979 aa10.76□□□□□ -0.69
TRAPPC4-206ENST00000525303 FANCMQ8IYD8 2048 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 MEIS3P2A8K0S8 358 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 CTSAP10619 480 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 SFPQP23246 707 aaKnown RBP eCLIP10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 CDC42EP1Q00587 391 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 XKR3Q5GH77 459 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 ATAT1Q5SQI0 421 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 GLB1LQ6UWU2 654 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 MIER3Q7Z3K6 550 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 RHPN2Q8IUC4 686 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 ZDHHC14Q8IZN3 488 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 FEZF2Q8TBJ5 459 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 TBCKQ8TEA7 893 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 BCL7CQ8WUZ0 217 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 IGSF21Q96ID5 467 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 TRAIPQ9BWF2 469 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 NIFKQ9BYG3 293 aaKnown RBP10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 GBP3Q9H0R5 595 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 NRDE2Q9H7Z3 1164 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 PDRG1Q9NUG6 133 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 TBC1D13Q9NVG8 400 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 LIMD1Q9UGP4 676 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 INPP5FQ9Y2H2 1132 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 IRAK3Q9Y616 596 aa10.75□□□□□ -0.69
TRAPPC4-206ENST00000525303 IGKV6-21A0A0C4DH24 114 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 PSMD10O75832 226 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 STBD1O95210 358 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 TDP2O95551 362 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 GALTP07902 379 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 SKIP12755 728 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 DNM2P50570 870 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 POLGP54098 1239 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 NLRP5P59047 1200 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 CCT2P78371 535 aaKnown RBP10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 RNASELQ05823 741 aaKnown RBP10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 GIT2Q14161 759 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 RABEP1Q15276 862 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 Q4G0T1 1027 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 NOMO2Q5JPE7 1267 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 POTEHQ6S545 545 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 TMC5Q6UXY8 1006 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 DDX53Q86TM3 631 aaKnown RBP10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 CABP7Q86V35 215 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 ZNF410Q86VK4 478 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 KSR1Q8IVT5 923 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 RDM1Q8NG50 284 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 SLC22A17Q8WUG5 538 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 RSPH1Q8WYR4 309 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 NLRP4Q96MN2 994 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 CEP89Q96ST8 783 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 VN1R3Q9BXE9 311 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 AGXT2Q9BYV1 514 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 MFSD1Q9H3U5 465 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 NCOA5Q9HCD5 579 aaKnown RBP10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 FAM105AQ9NUU6 356 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 SUCLA2Q9P2R7 463 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 DNAJB4Q9UDY4 337 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 USTQ9Y2C2 406 aa10.74□□□□□ -0.69
TRAPPC4-206ENST00000525303 CARNS1A5YM72 827 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 SPDYE4A6NLX3 237 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 DDX11L8A8MPP1 907 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 PROB1E7EW31 1015 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 B4GALT3O60512 393 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 MAFO75444 373 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 OFD1O75665 1012 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 IFNAR1P17181 557 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 SLC11A1P49279 550 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 RAB27AP51159 221 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 PTPN14Q15678 1187 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 ASTLQ6HA08 431 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 B3GNT9Q6UX72 402 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 ASCL5Q7RTU5 278 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 CATSPER4Q7RTX7 472 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 ZNF280BQ86YH2 543 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 INO80BQ9C086 356 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 SH3GLB2Q9NR46 395 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 CYP26B1Q9NR63 512 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 GVINP1Q7Z2Y8 2422 aa10.73□□□□□ -0.69
TRAPPC4-206ENST00000525303 ZNF292O60281 2723 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms